CB290210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290210 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 1.803e-14 Identity = 23/30 (76.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 181 DKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 270 +KAPYVAK+EKRKVEYEK+M+ YN++QAEG Sbjct: 90 EKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119 HSP 2 Score: 44.2838 bits (103), Expect = 1.803e-14 Identity = 17/28 (60.71%), Postives = 24/28 (85.71%), Query Frame = 3 Query: 15 YKKDHPKNKSFAAVGKAGGEKWKSMSEA 98 + K+HP+NK+ +AVGKA G KWK+MS+A Sbjct: 62 FNKEHPENKAVSAVGKAAGAKWKTMSDA 89
BLAST of CB290210 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 2.607e-12 Identity = 18/30 (60.00%), Postives = 27/30 (90.00%), Query Frame = 1 Query: 181 DKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 270 +KAP+++KAEKRK EYEK+++ YN++QA G Sbjct: 82 EKAPFISKAEKRKQEYEKNLQAYNKKQAAG 111 HSP 2 Score: 45.0542 bits (105), Expect = 2.607e-12 Identity = 18/28 (64.29%), Postives = 22/28 (78.57%), Query Frame = 3 Query: 15 YKKDHPKNKSFAAVGKAGGEKWKSMSEA 98 YK+ HP NKS A VGKAGG+KWK ++ A Sbjct: 54 YKEKHPNNKSVAVVGKAGGDKWKQLTAA 81
BLAST of CB290210 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 3.548e-11 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 9 EQYKKDHPKNKSFAAVGKAGGEKWKSMSE 95 EQYKKDHP NKS AAVGKA GE+WKS+SE Sbjct: 61 EQYKKDHPNNKSVAAVGKACGEEWKSLSE 89 HSP 2 Score: 32.7278 bits (73), Expect = 3.548e-11 Identity = 13/27 (48.15%), Postives = 21/27 (77.78%), Query Frame = 1 Query: 178 QDKAPYVAKAEKRKVEYEKDMKNYNRR 258 ++KAPYV +A K+K EYE ++ YN++ Sbjct: 90 EEKAPYVDRALKKKEEYEITLQAYNKK 116 The following BLAST results are available for this feature:
BLAST of CB290210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290210 ID=CB290210; Name=CB290210; organism=Citrus sinensis; type=EST; length=731bpback to top |