CB290222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.261e-59 Identity = 113/196 (57.65%), Postives = 139/196 (70.92%), Query Frame = -1 Query: 270 LRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFKQ 857 L+HL F+RIA I L VS+LY+YAK+NSGPL+S V VE AVT VV PVYQKFK VP E S KFDEHAPP+AK+V +Q H LI A++KAQ+ V EA+TGGP+AA +YAA E K +VTNSVK W KLN Y H M D A+P AA +S +YN LV +MT GY++ GYLPLVP+DDI KA+++ Sbjct: 13 LKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEK 208
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.461e-32 Identity = 83/212 (39.15%), Postives = 115/212 (54.25%), Query Frame = -1 Query: 273 QELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVH------YAAAE-------SKHLLVTN--SVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFK 863 + L++L F+++AAI +VC SSLY+YAK NSGPL+ V TVE V V+GPVY+KF VP + + + + H P L KR + Q ++ + A + A + SE Q G Y+ E SK+ V +V AW LN LF +A + VPTAA WS+KYN V ++GYTV YLPL+P + IAK F+ Sbjct: 18 KRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQ 229
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.156e-28 Identity = 81/215 (37.67%), Postives = 114/215 (53.02%), Query Frame = -1 Query: 270 QELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGG-----------------PRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFKQ 863 + L++L F++ AA++AL+ + +Y AK SGPL+ V +VE AV VVGPVY+K+ VP D + + D PP+ K+V++Q S + A A+ L SE + G P A YA E K +V AW KLN LF +A +AVPTAA S+KYN VV+ +KGY V Y+PLVP + I+K F + Sbjct: 20 ERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPK--AEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.208e-24 Identity = 72/205 (35.12%), Postives = 107/205 (52.20%), Query Frame = -1 Query: 276 QELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAF 863 + LR+L F++ AA Q LV ++ Y YAK+ +GPLR V VE V AVVGPVY +F GVP E+ ++ D PP LA+ A++V L+ TA+ A++ ++ A+ PRA Y E + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 33 ERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.208e-24 Identity = 72/205 (35.12%), Postives = 107/205 (52.20%), Query Frame = -1 Query: 276 QELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAF 863 + LR+L F++ AA Q LV ++ Y YAK+ +GPLR V VE V AVVGPVY +F GVP E+ ++ D PP LA+ A++V L+ TA+ A++ ++ A+ PRA Y E + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 33 ERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.015e-22 Identity = 65/174 (37.36%), Postives = 87/174 (50.00%), Query Frame = -1 Query: 276 LYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAF 797 LY YAK +GPL+ V TVE AV VV PVY +F VP E D H P K+V+SQ A+++VSE + G ++ + +V AW KLN LF +A+ +P AA ++KYN ++V +KGY V YLPLVP + IAK F Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVPSNVKKVSSQ-----------ARSVVSEVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVF 164
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.954e-21 Identity = 65/196 (33.16%), Postives = 100/196 (51.02%), Query Frame = -1 Query: 276 QELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAF 863 + L++L F+R A + A+ S+LY YAK SGPL+ V T+E+ V VV PVY +P D + D PP+ K+V++Q +S+ + A + ++ S G + A + +V W LN L +A++ VPTA +S+KYN +V T++GY V YLPL+P + I K F Sbjct: 8 ERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVF 199
BLAST of CB290222 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.822e-20 Identity = 60/202 (29.70%), Postives = 98/202 (48.51%), Query Frame = -1 Query: 270 ELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXDEASRKFDEHAPPLAKRVASQVHSLIETASQ-----KAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFKQ 860 +L+HL F+++AA+ C S+LY+ AK N+GPL+ V +E V V+ P+Y+KF VP D+ + + P L K+ +SQ ++ + +++ + AA +YAA W LN LF +A + +PTA WS+KYN V + + Y YLP++PI+ I+ +Q Sbjct: 40 KLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAAT------------LWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQ 229 The following BLAST results are available for this feature:
BLAST of CB290222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290222 ID=CB290222; Name=CB290222; organism=Citrus sinensis; type=EST; length=863bpback to top |