CB290281

Overview
NameCB290281
Unique NameCB290281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8473 contig Csv1_Contig8473:289..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290281 vs. ExPASy Swiss-Prot
Match: EIN3_ARATH (Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.488e-21
Identity = 78/219 (35.62%), Postives = 107/219 (48.86%), Query Frame = -3
Query:  279 CPYKSGASEF--AGSDFHVNEVKPVIFPQTFAQSKPAGPTFNSVQPSFDISGLGVPEDGQKMISELMSIYDNNIQGNRNVNPSNNAVVTEGQNT--LQPRAQHQQEYYHGQGAVMDGNLFE--------GSNMHDNNHLMFPREENQFDRFKI-------MXXXXXXXXXXXXXXXSLMFES-PFDLGSFDYKEDFQAAG-VDTM-----PKHDSSVWF 857
            CP++     +  A S FHVNEVKPV+    F Q +P     NSV    D++G+ VPEDGQKMISELMS+YD N+Q N+       ++V E Q+   LQP   + QE+    G +++G+ FE         +N   NN   F    N  + FK                         L+F+S PFD+ SFDY++D    G V TM      + D S+WF
Sbjct:  424 CPHRDSRLPYGAAPSRFHVNEVKPVV---GFPQPRPV----NSVAQPIDLTGI-VPEDGQKMISELMSMYDRNVQSNQ------TSMVMENQSVSLLQPTVHNHQEHLQFPGNMVEGSFFEDLNIPNRANNNNSSNNQTFFQGNNNNNNVFKFDTADHNNFEAAHNNNNNSSGNRFQLVFDSTPFDMASFDYRDDMSMPGVVGTMDGMQQKQQDVSIWF 628          
BLAST of CB290281 vs. ExPASy Swiss-Prot
Match: EIL1_ARATH (ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 61/204 (29.90%), Postives = 97/204 (47.55%), Query Frame = -3
Query:  279 CPYKSGASEFAGSDFHVNEVKPVIFPQTFAQSKPAGPTFNSVQPSFDISGLGVPEDGQKMISELMSIYDNNIQGNRN--VNPSNNAVVTEGQNTLQPRAQHQQEYYHGQGAVMDGNLFEGSNMHDNNHLMFPREENQFDRFKIMXXXXXXXXXXXXXXXSLMFES-PFDLGSFDYKEDFQAAGVDTMPK--------HDSSVWF 857
            CPY+     +  S FH+  +K V+         P  P    VQP  D+SG+GVPE+GQKMI+ELM++YD N+Q N+       N ++V + +      AQ+QQ  ++    +    + +G+N   NN            RF+                  ++F+S PFD+ +FDY++D+Q   ++ M K         D S+WF
Sbjct:  433 CPYRDNRLAYGASKFHMGGMKLVV---------PQQP----VQP-IDLSGVGVPENGQKMITELMAMYDRNVQSNQTPPTLMENQSMVIDAK-----AAQNQQLNFNSGNQMF---MQQGTNNGVNN------------RFQ------------------MVFDSTPFDMAAFDYRDDWQTGAMEGMGKQQQQQQQQQDVSIWF 584          
The following BLAST results are available for this feature:
BLAST of CB290281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EIN3_ARATH1.488e-2135.62Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thal... [more]
EIL1_ARATH1.948e-1329.90ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae08_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290281 ID=CB290281; Name=CB290281; organism=Citrus sinensis; type=EST; length=862bp
TTTTTTTTTTTTCAATCAAATTACACTAACTTATTTATTTGACATTTCAC
TTCATACACATAATTTAGCAGTAACAGCATCAGGCATCTTCTATGGGAAT
TTTACCACCTTTCTTATTAGCCCATCTCACAACCTGCTTCGCTTCTAATT
TCTACAGCTAAAAGAAAAATACAACTAACAGCTTTTTAACATAATTAAAG
TTTTACCACATCATAAGCCAATACCGAAGCCATAAAATATGCCCAGAGGA
TGAGGATGAGAAGCTGGCATTGTTTTTAAAACCAGACTGAGCTATCATGC
TTCGGCATGGTATCCACCCCTGCTGCTTGAAAATCCTCTTTATAATCGAA
GGATCCTAAGTCGAATGGAGACTCAAACATCAAGCTAAAATTGTTGTTGC
TGCCGCTGCTGTTGTTCTCGAATGGAGAATTCATAATCTTAAACCGATCA
AATTGATTTTCCTCTCGTGGGAACATCAGATGATTGTTATCATGCATGTT
GGATCCTTCGAACAAGTTCCCATCCATTACAGCTCCTTGACCATGGTAAT
ACTCCTGCTGATGCTGAGCTCTTGGCTGAAGAGTATTTTGACCTTCTGTC
ACAACGGCGTTGTTACTGGGATTCACATTCCTGTTTCCTTGGATATTGTT
ATCATAGATCGACATGAGCTCACTAATCATTTTTTGACCATCTTCTGGAA
CTCCAAGTCCTGATATATCAAAGGAAGGTTGCACAGAATTAAACGTTGGA
CCTGCTGGCTTGGACTGGGCAAATGTTTGAGGGAAAATAACTGGTTTCAC
TTCATTAACATGAAAATCAGACCCAGCAAACTCTGAAGCACCACTTTTAT
ATGGGCATGTCA
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