CB290285

Overview
NameCB290285
Unique NameCB290285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length402
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:70..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 4.862e-50
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 1 
Query:   52 MASETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            MASET TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L AQPELFIHI+PDK +N+LSIIDSGIGMTK+DLVN LGTIARSGTKEFMEALAAGADVS
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.862e-50
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 1 
Query:   52 MASETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            MASET TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L AQPELFIHI+PDK +N+LSIIDSGIGMTK+DLVN LGTIARSGTKEFMEALAAGADVS
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 6.349e-50
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 1 
Query:   52 MASETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            MASET TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L AQPELFIHI+PDK +N+LSIIDSG+GMTK+DLVN LGTIARSGTKEFMEALAAGADVS
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 6.349e-50
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 1 
Query:   52 MASETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            MASET TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L AQPELFIHI+PDK +N+LSIIDSG+GMTK+DLVN LGTIARSGTKEFMEALAAGADVS
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 1.564e-48
Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 1 
Query:   58 SETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            ++  TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L  QPELFIHIIPDKTNN+L+IIDSGIGMTKADLVN LGTIARSGTKEFMEALAAGADVS
Sbjct:    2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.564e-48
Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 1 
Query:   58 SETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            ++  TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L  QPELFIHIIPDKTNN+L+IIDSGIGMTKADLVN LGTIARSGTKEFMEALAAGADVS
Sbjct:    2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 2.668e-48
Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 1 
Query:   58 SETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            S+  TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L  QPELFIHIIPDK NN+L+IIDSGIGMTKADLVN LGTIARSGTKEFMEALAAGADVS
Sbjct:    2 SDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 4.259e-46
Identity = 96/115 (83.48%), Postives = 103/115 (89.57%), Query Frame = 1 
Query:   58 SETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            +E  TFAF AEINQL+SLIINTFYSNKEIFLRELISN+SDALDKI FESLT KS L AQPELFI ++PDKTN +LSIIDSG+GM KADLVN LGTIARSGTKEFMEAL AGADVS
Sbjct:    7 AEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVS 121
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 7.265e-46
Identity = 96/115 (83.48%), Postives = 103/115 (89.57%), Query Frame = 1 
Query:   58 SETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGADVS 402
            ++  TFAF AEINQL+SLIINTFYSNKEIFLRELISNSSDALDKI FESLT KS L  QPELFI ++PDK+N +LSIIDSGIGMTKADLVN LGTIARSGTKEFMEAL AGADVS
Sbjct:    2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVS 116
[Close]
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.049e-44
Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 1 
Query:   58 SETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGA-DVS 402
            +ET TFAF AEINQL+SLIINTFYSNKEIFLRELISN+SDALDKI FESLT KS + AQPELFI ++PDK + +LSIIDSG+GMTK+DLVN LGTIARSGTKEFMEALAAGA DVS
Sbjct:   12 AETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSNVNAQPELFIRLVPDKASKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGATDVS 127
The following BLAST results are available for this feature:
BLAST of CB290285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP81_ORYSJ4.862e-5088.89Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI4.862e-5088.89Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ6.349e-5088.03Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ6.349e-5088.03Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP83_ARATH1.564e-4887.83Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH1.564e-4887.83Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP80_SOLLC2.668e-4887.83Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP83_IPONI4.259e-4683.48Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP81_ARATH7.265e-4683.48Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP82_MAIZE1.049e-4481.90Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290285 ID=CB290285; Name=CB290285; organism=Citrus sinensis; type=EST; length=402bp
TGGTTATAAGTGGGAAGAGATAGTTTTTTGGTTGAACGGCAGGTCGTTTC
GATGGCATCAGAGACACCGACGTTTGCCTTTCTGGCTGAGATCAACCAGT
TGGTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCTT
CGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCGGATTTGA
AAGCTTGACATACAAGAGCTAGCTATATGCCCAACCAGAGCTTTTCATTC
ACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGGT
ATTGGCATGACTAAGGCTGATTTGGTGAACAAGCTTGGGACAATTGCTAG
GTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTGA
GC
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