CB290288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN1B_LOTJA (GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13 Identity = 38/53 (71.70%), Postives = 39/53 (73.58%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGDPNLHFVESPALAPPEVQID ASQPLPDDDDDAF+ Sbjct: 157 RKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFD 209
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN1A_LOTJA (GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13 Identity = 38/53 (71.70%), Postives = 39/53 (73.58%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGDPNLHFVESPALAPPEVQID ASQPLPDDDDDAF+ Sbjct: 157 RKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAQAASQPLPDDDDDAFD 209
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12 Identity = 37/53 (69.81%), Postives = 38/53 (71.70%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGD NLHFVESPALAPPEVQID A+QPLPDDDDDAFE Sbjct: 169 RKLAGDANLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12 Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGDPNLHFVESPALAPPEVQID ASQPLPDDDD+ F+ Sbjct: 169 RKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12 Identity = 37/53 (69.81%), Postives = 37/53 (69.81%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGD NLHFVESPALAPPEVQID ASQPLPDDDDD FE Sbjct: 169 RKLAGDANLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.154e-12 Identity = 35/53 (66.04%), Postives = 37/53 (69.81%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGD NLHFVESPALAPPEVQID +QPLPDDDD+AFE Sbjct: 169 RKLAGDGNLHFVESPALAPPEVQIDLAAQALHEQELQAALNQPLPDDDDEAFE 221
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11 Identity = 35/53 (66.04%), Postives = 37/53 (69.81%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGD NLHFVESPALAPPEV +D A+QPLPDDDDDAFE Sbjct: 169 RKLAGDQNLHFVESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11 Identity = 35/53 (66.04%), Postives = 37/53 (69.81%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGD NLHFVESPALAPPEV ID A+QPLPDDDD+AFE Sbjct: 169 RKLAGDGNLHFVESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221
BLAST of CB290288 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11 Identity = 34/53 (64.15%), Postives = 36/53 (67.92%), Query Frame = -1 Query: 622 RKLAGDPNLHFVESPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 780 RKLAGD NLHFVE+PALAPPEV ID A+QPLPDDDDD FE Sbjct: 169 RKLAGDQNLHFVETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221 The following BLAST results are available for this feature:
BLAST of CB290288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290288 ID=CB290288; Name=CB290288; organism=Citrus sinensis; type=EST; length=780bpback to top |