CB290291

Overview
NameCB290291
Unique NameCB290291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: STSY_RAUSE (Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.215e-44
Identity = 96/240 (40.00%), Postives = 146/240 (60.83%), Query Frame = 2
Query:   47 VIFLFINSS----TQGVVQYQIEG-AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSP--NRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP 745
            V  LF++SS    +  + +  IE  +  P S  FD+  +G YT V DGR+IK+      ++ FA  SP  N+  CE + +   A K  +CGR   + +N  N  LYI D Y+ L  VG EGG AT +AT  +G+PF++  ++ +DQ TGI+YFTD S+ +  R    ++ + DKTGRL+KYDP+TK+ T+LL  L  P G  +S D +++L+AE  S +I++YWL+  K GT E++ ++P
Sbjct:   15 VFLLFLSSSLALSSPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTD---AEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP 251          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: STSY_RAUMA (Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.215e-44
Identity = 96/240 (40.00%), Postives = 146/240 (60.83%), Query Frame = 2
Query:   47 VIFLFINSS----TQGVVQYQIEG-AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSP--NRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP 745
            V  LF++SS    +  + +  IE  +  P S  FD+  +G YT V DGR+IK+      ++ FA  SP  N+  CE + +   A K  +CGR   + +N  N  LYI D Y+ L  VG EGG AT +AT  +G+PF++  ++ +DQ TGI+YFTD S+ +  R    ++ + DKTGRL+KYDP+TK+ T+LL  L  P G  +S D +++L+AE  S +I++YWL+  K GT E++ ++P
Sbjct:   13 VFLLFLSSSLALSSPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTD---AEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP 249          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: STS1_ARATH (Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.198e-43
Identity = 92/207 (44.44%), Postives = 131/207 (63.29%), Query Frame = 2
Query:  113 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART--SPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIE 727
            GPE+ AFD+ G+G YTGVS G+I+K+   +  ++ FA+   S N   C+G      A +   CGRP G+ FN+  GDLY+ADA  GL  + P GGLAT +    +G PF+F + LD+D +TG++YFT  SS+F     +  +   D TG+L KYDP+TK VTVL+  LS   G A+S DG+++L+++ T   I RYW+K  KAG+ E
Sbjct:   38 GPEAFAFDSTGKGFYTGVSGGKILKY-LPETGYVDFAQITESSNSSWCDGTIGTALAGR---CGRPAGIAFNEKTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQFTKSNIKRYWIKGPKAGSSE 240          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: STS3_ARATH (Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.215e-42
Identity = 100/247 (40.49%), Postives = 143/247 (57.89%), Query Frame = 2
Query:   11 MNSSLSFIAKSLVIFLFINSSTQGVVQYQIE------GAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR--TSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIE 727
            M S +S I  SL++ L  +SS     +   +         GPE+ AFD+ G+G YTGV+ G+I+K+   ++ ++ FA+   S     C+GA    +  K   CGRP G+ FN   GDLY+ADA  GL  +   GGLA  +A    G PF F + LD+D +TG++YFT  SS F  R+ +  + + D TG+  KYDP+ K VTVL+  LS   G A+S DG+++L+ + T   I RYW+K SKAGT E
Sbjct:    2 MRSFVSLI--SLLLLLSFSSSVLSTKKSSFQKLPVPGNRTGPEAFAFDSTGKGFYTGVTGGKILKY-LPKKGYVDFAQITNSSKSSLCDGALGTTNVEK---CGRPAGIAFNTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLVGQFTKSNIKRYWIKGSKAGTSE 242          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: STSY_CATRO (Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.310e-40
Identity = 93/256 (36.33%), Postives = 146/256 (57.03%), Query Frame = 2
Query:   14 NSSLSFIAKSLVIFLFINSSTQG-------VVQYQIEG-AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSP--NRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSS--QFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP 745
            + S S +A   + FL + SS+         + +  IE  +  P +  FD+  +G YT V DGR+IK+      +  FA  SP  N+  CE + + +   K  +CGR   + ++  N  +YI D ++ L  VG EGG AT +AT  +G+PF++  ++ +DQ TGI+YFTD SS           ++ + D+TGRLMKYDP+TK+ T+LL  L  P G  +S DG+++++AE  S RI++YWL+  K G+ E +  +P
Sbjct:    5 SESKSMMAVFFMFFLLLLSSSSSSSSSSPILKKIFIESPSYAPNAFTFDSTDKGFYTSVQDGRVIKYEGPNSGFTDFAYASPFWNKAFCENSTDPE---KRPLCGRTYDISYDYKNSQMYIVDGHYHLCVVGKEGGYATQLATSVQGVPFKWLYAVTVDQRTGIVYFTDVSSIHDDSPEGVEEIMNTSDRTGRLMKYDPSTKETTLLLKELHVPGGAEISADGSFVVVAEFLSNRIVKYWLEGPKKGSAEFLVTIP 257          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.150e-31
Identity = 87/219 (39.73%), Postives = 126/219 (57.53%), Query Frame = 2
Query:  101 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFR---FCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP 745
            E  +GPESLA   +G+  YTG +DG+I+K    + R +H   T   +  C G+ E+     EH CGRPLG+     NG L++ADAY GL +V P  G   ++ +  + I  R   F N LD+ Q    +YFTDSSS++QRR+ + +I+     GR+++YD  TK+V V++ NL FPNG+ L  D   +L+AETT  RI R  +   +K G    +  LP
Sbjct:   96 ERLVGPESLA--NIGDVFYTGTADGKIVKI---EGRNIHVLATI-GKPPC-GSREH-----EHTCGRPLGIRVGP-NGTLFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAETTMARIKRVHVSGLNKGGMDTFIENLP 301          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.171e-31
Identity = 86/216 (39.81%), Postives = 124/216 (57.41%), Query Frame = 2
Query:  110 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFR---FCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP 745
            +GPES+A    G+  YTG +DG+I+K   + +     AR    +  C+G+ E     +E  CGRPLG+     NG L++ADAY GL KV P  G  T + +  + +  R   F N LD+ Q    +YFTDSSS++QRR+++ +I+     GR+++YD  TK+VTVL+ NL F NG+ L  D   +L+AETT  RI R  +   +K G    V  LP
Sbjct:   99 VGPESIA--NFGDLIYTGTADGKIVKI--EGKSITVIARLG--KPPCDGSRE-----QEPSCGRPLGIRVGP-NGTLFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAETTMARIRRVHVSGLNKGGMDTFVDNLP 302          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.377e-30
Identity = 82/216 (37.96%), Postives = 121/216 (56.02%), Query Frame = 2
Query:  110 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGP---EGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP 745
            +GPES+A   +G+  +TG +DGR++K    +   +    + P +   +          E +CGRPLG+     NG L++ADAY GL +V P   E  L  +  T  EG    F N L + Q    IYFTDSSS++QRR+++ +++ G   GRL++YD  T++V VLL  L FPNGV LS   +++L+AETT  RI R ++    K G    V  +P
Sbjct:  100 VGPESIAH--IGDVMFTGTADGRVVKLENGEIETIARFGSGPCKTRDD----------EPVCGRPLGIRAGP-NGTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMP 302          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.704e-28
Identity = 79/215 (36.74%), Postives = 117/215 (54.42%), Query Frame = 2
Query:  113 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGG---LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP 745
            GPES+    +G+  +TG +DGR++K    +   +    + P +   +          E  CGRPLG+     NG L++ DAY GL +V P+     L  +  T  EG    F N L I +    IYFTDSSS++QRR+++ +++ G   GRL++YD  TK+V VLL  L FPNGV LS + +++L+AET   RI R ++    K G    V  +P
Sbjct:   61 GPESIV--NIGDVLFTGTADGRVVKLENGEIETIARFGSGPCKTRDD----------EPTCGRPLGIRVGP-NGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTITRDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETAMARIRRVYVSGLMKGGADMFVENMP 262          
BLAST of CB290291 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.906e-28
Identity = 80/216 (37.04%), Postives = 117/216 (54.17%), Query Frame = 2
Query:  110 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGG---LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP 745
            +GPES+    +G+  +TG +DG+I+K    + + +  AR      G            E  CGRPLG+     N  L++ADAY+GL +V P  G   +  +  T  EG    F N L + Q    IYFTDSSS++QRR+ + +++ G   GRL++YD  TK+V VL+  L FPNGV LS   +++L+ ET   RI RY++    K G    V  +P
Sbjct:   99 VGPESIV--NIGDVLFTGTADGKILKIEDGEVQTV--ARIGHGPCGTP--------EDEPTCGRPLGIRVGPNN-TLFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMP 301          
The following BLAST results are available for this feature:
BLAST of CB290291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
STSY_RAUSE2.215e-4440.00Strictosidine synthase OS=Rauvolfia serpentina GN=... [more]
STSY_RAUMA2.215e-4440.00Strictosidine synthase (Fragment) OS=Rauvolfia man... [more]
STS1_ARATH3.198e-4344.44Strictosidine synthase 1 OS=Arabidopsis thaliana G... [more]
STS3_ARATH1.215e-4240.49Strictosidine synthase 3 OS=Arabidopsis thaliana G... [more]
STSY_CATRO3.310e-4036.33Strictosidine synthase OS=Catharanthus roseus GN=S... [more]
APMAP_DANRE2.150e-3139.73Adipocyte plasma membrane-associated protein OS=Da... [more]
APMAP_SALSA8.171e-3139.81Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_HUMAN2.377e-3037.96Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_RAT1.704e-2836.74Adipocyte plasma membrane-associated protein OS=Ra... [more]
APMAP_CHICK2.906e-2837.04Adipocyte plasma membrane-associated protein OS=Ga... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01af01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01af01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290291 ID=CB290291; Name=CB290291; organism=Citrus sinensis; type=EST; length=746bp
CGCCCTATGCATGAACTCAAGTCTCAGCTTCATCGCTAAAAGCCTAGTCA
TTTTTCTTTTTATCAATAGTTCTACTCAAGGTGTCGTTCAGTATCAGATA
GAGGGTGCAATTGGACCTGAAAGTCTTGCATTTGATGCACTTGGAGAGGG
TCCTTATACCGGCGTATCCGATGGCCGTATTATTAAATGGCACCAAGACC
AACGCCGCTGGCTTCATTTTGCTCGAACCTCTCCAAACAGGGATGGTTGT
GAAGGGGCATATGAATATGATCATGCGGCAAAGGAGCACATATGTGGGCG
TCCGTTAGGTTTGTGCTTCAATAAAACCAACGGTGATCTCTACATCGCTG
ACGCTTATTTTGGATTGCTTAAAGTGGGACCCGAAGGAGGATTGGCCACT
GCCGTTGCTACTCAATCAGAGGGCATTCCTTTCAGATTCTGTAATAGTCT
AGACATCGATCAATCCACCGGAATCATCTATTTTACCGACAGCAGTTCAC
AGTTTCAAAGGAGGAACCACATTTCTGTAATACTAAGTGGTGATAAAACA
GGAAGGCTAATGAAGTATGACCCAGCAACAAAACAAGTAACTGTTCTTCT
TGGGAATCTCTCATTTCCAAATGGGGTGGCTTTGAGTGAAGATGGCAACT
ACATATTACTTGCAGAGACAACAAGCTGCAGAATTCTAAGGTATTGGCTA
AAAACATCGAAAGCCGGAACAATAGAAATCGTCGCTCAACTCCCAG
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