CB290372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: SAS10_RAT (Something about silencing protein 10 OS=Rattus norvegicus GN=Utp3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.641e-17 Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 99 DFGLQDAGDSEDNEDESDKGLTLEEISIKGKSTTKP---------WASKEA-----VDDAVTSYEEVKKDLNALSKEEQMDVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEIL 626 D+G + G E E ++ EE + + T+ W A VD+A T V KDL +S +E++ ++ +PEL+ L+ +L L +++ ++ PL+ V++ I G +YL+ K L L YC I+FYL+LK+ P HPVI RLV + L++K+ +D+ L SE+ +L Sbjct: 136 DYGSKSRGRQSQQEVEEEEREEEEEAQVIQRRLTQALQEDDFGVAWVEAFAKPVPQVDEAET---RVVKDLAKVSVKEKLKMLRKESPELLELIEDLKVKLTEVKDELEPLIQLVEKGVIPPGKGSQYLKTKYNLYLNYCANISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLL 322
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: SAS10_MOUSE (Something about silencing protein 10 OS=Mus musculus GN=Utp3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.641e-17 Identity = 60/190 (31.58%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 99 DFGLQDAGDSEDNEDESDKGLTLEEISIKGKSTTKP---------WASKEA-----VDDAVTSYEEVKKDLNALSKEEQMDVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEIL 626 D+G + G E E ++ EE I + + W A VD+A T V KDL +S +E++ ++ +PEL+ L+ +L L +++ ++ PLL V++ I G YL+ K L L YC I+FYL+LK+ P HPVI RLV + L++K+ +D+ L SE+ +L Sbjct: 136 DYGSKSRGRQSQQEVEEEEREEEEEAQIIQRRLAQALQEDDFGVAWVEAFAKPVPQVDEAET---RVVKDLAKVSVKEKLKMLKKESPELLELIEDLQAKLTEVKDELEPLLQLVEKGVIPTGRGSEYLKTKYNLYLNYCANISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLL 322
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: SAS10_HUMAN (Something about silencing protein 10 OS=Homo sapiens GN=UTP3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.450e-17 Identity = 60/190 (31.58%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 99 DFGLQDAGDSEDNEDESDKGLTLEEISIKGKSTTKP---------WASKEA-----VDDAVTSYEEVKKDLNALSKEEQMDVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEIL 626 D+G + G E E ++ EE I + + W A VD+A T V KDL +S +E++ ++ +PEL+ L+ +L L +++ ++ PLL V++ I G +YL K L L YC I+FYL+LK+ P HPVI RLV + L++K+ +D+ L SE+ +L Sbjct: 140 DYGSKSRGRQSQQEAEEEEREEEEEAQIIQRRLAQALQEDDFGVAWVEAFAKPVPQVDEAET---RVVKDLAKVSVKEKLKMLRKESPELLELIEDLKVKLTEVKDELEPLLELVEQGIIPPGKGSQYLRTKYNLYLNYCSNISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLL 326
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: SAS10_DROME (Something about silencing protein 10 OS=Drosophila melanogaster GN=Sas10 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15 Identity = 44/155 (28.39%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 228 DDAVTSYEEVKKDLNALSKEEQMDVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIK-QLDENLPSELDEILK--NDHSAEIAAKLVRENAKM 683 D+ ++ +V DL LS+ E+ +++S +PE + L + L++++ + P+LN V++ ++ + ++Y + +L YC + FYLLLK+ V+ HPVI RLV++K L++++K + +E + +L+ +L+ D A + + AK+ Sbjct: 154 DNELSHITKVTSDLAGLSERERRQLMHSESPEFIILTQDFQQHLDEVKNLLKPVLNYVRKHDVPMVPALQYAGLCHTVLTTYCSNVAFYLLLKARRIDVKAHPVIRRLVQLKDLIEELKPRYEEYIRPQLEALLERIEDGDAFTVLDVAQRKAKL 308
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: NGDN_DANRE (Neuroguidin OS=Danio rerio GN=ngdn PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13 Identity = 38/111 (34.23%), Postives = 68/111 (61.26%), Query Frame = 3 Query: 297 DVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEILK 629 DV+ P V LL+ L + + + V L+ KV+E+ G+ +L+++ LLL Y Q IT + LK+EGE ++D+ I RLV I+ +L+K++ LD+ L ++D++++ Sbjct: 9 DVIDRDLPTAVRLLNSLTEQIVSVTSHVRELIKKVREKAYQTSKGLSFLDLRYHLLLFYLQDITHLISLKTEGESLKDNSAIHRLVTIRTVLEKMRPLDQKLKYQIDKLVR 119
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: NGDNB_XENLA (Neuroguidin-B (Fragment) OS=Xenopus laevis GN=ngdn-B PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.148e-12 Identity = 36/111 (32.43%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 297 DVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEILK 629 DV+ P V L + L D + ++ V L KV+ + G+ +LE+K LLL Y Q +T +L K+ G+ ++ +P I RLVE++ +L+K++ +D+ L ++D+++K Sbjct: 5 DVILEDVPGSVNLFNTLQDQITKVTAHVQDLTQKVRSSIYNTDKGLSFLELKDQLLLFYLQDLTHLMLEKTNGKSIKGNPGILRLVELRTVLEKMRPIDQKLKYQIDKLVK 115
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: NGDN_BOVIN (Neuroguidin OS=Bos taurus GN=NGDN PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.500e-12 Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 297 DVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEILK 629 +V+ S P V LL L + + + +V L KV+ + E G+ LEVK LLL Y ++ +L K+ G ++ HP + RLVEI+ +L+K++ LD+ L ++D+++K Sbjct: 5 EVLESDLPNAVALLKNLQEQVMAVTAQVQTLTKKVQAKAYPTEKGLSLLEVKDQLLLMYLMDLSHLILDKASGGSLQGHPAVLRLVEIRTVLEKLRPLDQKLKYQIDKLVK 115
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: NGDNA_XENLA (Neuroguidin-A OS=Xenopus laevis GN=ngdn-A PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.959e-12 Identity = 36/111 (32.43%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 297 DVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEILK 629 DV+ P V L + L D + ++ V L KV+ + G+ +LE+K LLL Y Q +T +L K+ G+ ++ +P I RLVE++ +L+K++ +D+ L ++D+++K Sbjct: 6 DVILEDVPGSVNLFNTLQDQITKVTAHVQDLTQKVRSGIYNTDKGLSFLELKDQLLLFYLQDLTHLMLEKTNGKSIKGNPGILRLVELRTVLEKMRPIDQKLKYQIDKLVK 116
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: NGDN_HUMAN (Neuroguidin OS=Homo sapiens GN=NGDN PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12 Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 294 MDVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEILK 629 + V+ S P V LL L + + + +V L KV+ E G+ +LEVK LLL Y +T +L K+ G ++ H + RLVEI+ +L+K++ LD+ L ++D+++K Sbjct: 4 LGVLESDLPSAVTLLKNLQEQVMAVTAQVKSLTQKVQAGAYPTEKGLSFLEVKDQLLLMYLMDLTHLILDKASGGSLQGHDAVLRLVEIRTVLEKLRPLDQKLKYQIDKLIK 115
BLAST of CB290372 vs. ExPASy Swiss-Prot
Match: NGDN_MOUSE (Neuroguidin OS=Mus musculus GN=Ngdn PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.270e-11 Identity = 35/111 (31.53%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 297 DVVYSSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAITFYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEILK 629 +V+ S + LL L + + + ++ L KV+ E G+ +LEVK LLL Y ++ +L K+ G ++ HP + RLVEI+ +L+K++ LD+ L ++D+++K Sbjct: 5 EVLESDVSSSITLLKNLQEQVMAVTAQIQALTTKVRAGTYSTEKGLSFLEVKDQLLLMYLMDLSHLILDKASGASLQGHPAVLRLVEIRTVLEKLRPLDQKLKYQIDKLVK 115 The following BLAST results are available for this feature:
BLAST of CB290372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290372 ID=CB290372; Name=CB290372; organism=Citrus sinensis; type=EST; length=809bpback to top |