CB290389

Overview
NameCB290389
Unique NameCB290389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB290389_ssr222 microsatellite CB290389_ssr222:222..231. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig130 contig Csv1_Contig130:1..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.198e-72
Identity = 136/183 (74.32%), Postives = 152/183 (83.06%), Query Frame = 1
Query:  235 MEEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            MEEE+    VLF KYEMGRLLGKGTF KVYYGK++ TGESVAIK+INKDQ+K+E MMEQIKREIS+MRLVRHPN+VEL+EVMATK KIF  MEYVKGGELF+K+ +G+L+ED ARKYFQQLISAVDFCHSRGVSHR                +SDFGLSALPEQ+  DGLLHTQCGTPAYVAP
Sbjct:   29 MEEEQQQLRVLFAKYEMGRLLGKGTFGKVYYGKEITTGESVAIKIINKDQVKREGMMEQIKREISIMRLVRHPNIVELKEVMATKTKIFFIMEYVKGGELFSKIVKGKLKEDSARKYFQQLISAVDFCHSRGVSHRDLKPENLLVDENGDLKVSDFGLSALPEQILQDGLLHTQCGTPAYVAP 211          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.729e-71
Identity = 134/181 (74.03%), Postives = 151/181 (83.43%), Query Frame = 1
Query:  235 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQ-LKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            MEEER VLFGKYEMGRLLGKGTFAKVYYGK+++ GE VAIKVINKDQ +K+  MMEQIKREIS+M+LVRHPN+VEL+EVMATK KIF  ME+VKGGELF K+++G+L ED AR+YFQQLISAVD+CHSRGVSHR                ISDFGLSALPEQ+  DGLLHTQCGTPAYVAP
Sbjct:    1 MEEERRVLFGKYEMGRLLGKGTFAKVYYGKEIIGGECVAIKVINKDQVMKRPGMMEQIKREISIMKLVRHPNIVELKEVMATKTKIFFVMEFVKGGELFCKISKGKLHEDAARRYFQQLISAVDYCHSRGVSHRDLKPENLLLDENGDLKISDFGLSALPEQILQDGLLHTQCGTPAYVAP 181          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPKG_ORYSJ (CBL-interacting protein kinase 16 OS=Oryza sativa subsp. japonica GN=CIPK16 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.467e-62
Identity = 117/186 (62.90%), Postives = 150/186 (80.65%), Query Frame = 1
Query:  223 RERHMEE-ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK-EFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            RE   ++ ER ++ G+YE+GRLLG+GTFAKVYYG+ L +GESVAIKVI+K +L++ E M+EQ++REIS+MR+VRHPNVV +REV+A++ ++FV MEY +GGELFAKVARGRL E+ AR+YFQQL++AV FCH RGV+HR                ++DFGL+ALPEQLR DGLLHTQCGTPAYVAP
Sbjct:    6 REEEADQVERKLVLGRYELGRLLGQGTFAKVYYGRDLRSGESVAIKVIDKARLRRTEGMVEQLRREISIMRMVRHPNVVGIREVLASRARVFVVMEYARGGELFAKVARGRLTEEHARRYFQQLVAAVGFCHGRGVAHRDLKPENLLLDEEGRLKVTDFGLAALPEQLRQDGLLHTQCGTPAYVAP 191          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.283e-62
Identity = 116/180 (64.44%), Postives = 143/180 (79.44%), Query Frame = 1
Query:  235 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            +E+  ++L  +YE+G+LLG+GTFAKVY+G+ ++T +SVAIKVI+KD++ K  +M+QIKREISVM+LVRHPN+V+L EVMATK KI+  +EYVKGGELF KVA+GRL+ED ARKYFQQL+SAVDFCHSRGV HR                I+DFGLSAL E  R DGLLHT CGTPAYVAP
Sbjct:    4 LEKNGNILLRRYEIGKLLGQGTFAKVYHGRNIVTSQSVAIKVIDKDKIFKVGLMDQIKREISVMKLVRHPNIVQLYEVMATKSKIYFVLEYVKGGELFNKVAKGRLKEDAARKYFQQLVSAVDFCHSRGVYHRDLKPENLLVDENGNLKITDFGLSALAESRRQDGLLHTTCGTPAYVAP 183          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.060e-60
Identity = 113/174 (64.94%), Postives = 138/174 (79.31%), Query Frame = 1
Query:  253 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            +L G+YE+GRLLG GTFAKVY+ + + TG+SVA+KV+ K+++ K  M++QIKREISVMR+V+HPN+VEL EVMA+K KI+ AME V+GGELFAKVA+GRLRED+AR YFQQLISAVDFCHSRGV HR                ++DFGLSA  E L+ DGLLHT CGTPAYVAP
Sbjct:   19 LLHGRYELGRLLGHGTFAKVYHARNIQTGKSVAMKVVGKEKVVKVGMVDQIKREISVMRMVKHPNIVELHEVMASKSKIYFAMELVRGGELFAKVAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEEGNLKVTDFGLSAFTEHLKQDGLLHTTCGTPAYVAP 192          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.996e-60
Identity = 116/180 (64.44%), Postives = 138/180 (76.67%), Query Frame = 1
Query:  235 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            ME++  VL  +YE+G+ LG+GTFAKVY+ + L TG+SVAIKVI+K+++ K  M EQIKREIS MRL+RHPN+VEL EVMATK KI+  ME+VKGGELF KV+ G+LRED+ARKYFQQL+ AVDFCHSRGV HR                ISDFGLSAL +  R DGLLHT CGTPAYVAP
Sbjct:    1 MEKKGSVLMLRYEVGKFLGQGTFAKVYHARHLKTGDSVAIKVIDKERILKVGMTEQIKREISAMRLLRHPNIVELHEVMATKSKIYFVMEHVKGGELFNKVSTGKLREDVARKYFQQLVRAVDFCHSRGVCHRDLKPENLLLDEHGNLKISDFGLSALSDSRRQDGLLHTTCGTPAYVAP 180          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.996e-60
Identity = 112/180 (62.22%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  235 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            ME++  +L  +YE+GR+LG+GTFAKVY+ + L + +SVAIKVI+K+++ +  M++QIKREIS+MRLVRHPN+V+L EVMA+K KI+ AMEYV+GGELF++VARGRL+ED ARKYFQQLI AVDFCHSRGV HR                +SDFGLSA  E  + DGLLHT CGTPAYVAP
Sbjct:    1 MEKKASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKREISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVARGRLKEDAARKYFQQLIGAVDFCHSRGVYHRDLKPENLLVDENGNLKVSDFGLSAFKECQKQDGLLHTTCGTPAYVAP 180          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.383e-59
Identity = 115/180 (63.89%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  235 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            M++   VL  KYE+GRLLG+GTFAKVY+ + + TGESVAIKVI+K ++ K  +++QIKREISVMRLVRHP+VV L EVMA+K KI+ AMEYVKGGELF KV++G+L+E++ARKYFQQLI A+D+CHSRGV HR                ISDFGLSAL E  + DGLLHT CGTPAYVAP
Sbjct:    1 MDKNGIVLMRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAP 180          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.286e-58
Identity = 114/179 (63.69%), Postives = 137/179 (76.54%), Query Frame = 1
Query:  238 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            E+  ++L  KYEMG+LLG+GTFAKVY+ +   T ESVAIK+I+K+++ K  +M+QIKREISVM+LVRHPN+V+L EVMATK KI+  +E+VKGGELF KV RGRL+ED ARKYFQQLI AVDFCHSRGV HR                +SDFGLSAL +  R DGLLHT CGTPAYVAP
Sbjct:    3 EQRGNMLMKKYEMGKLLGQGTFAKVYHARNTETSESVAIKMIDKEKVLKGGLMDQIKREISVMKLVRHPNIVQLYEVMATKTKIYFVLEHVKGGELFNKVQRGRLKEDAARKYFQQLICAVDFCHSRGVYHRDLKPENLLLDENSNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAP 181          
BLAST of CB290389 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.864e-58
Identity = 111/191 (58.12%), Postives = 140/191 (73.30%), Query Frame = 1
Query:  202 RQNSNFLRERHMEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 774
            R+  +  +++     + ++ GKYEMGRLLG GTFAKVY  +   +GESVAIKVI+K+++ K  ++  IKREIS++R VRHPN+V+L EVMATK KI+  MEYVKGGELF KVA+GRL+E++ARKYFQQLISAV FCH RGV HR                +SDFGLSA+ +Q+R DGL HT CGTPAYVAP
Sbjct:    6 RKVKSIKKKQDQSNHQALILGKYEMGRLLGHGTFAKVYLARNAQSGESVAIKVIDKEKVLKSGLIAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVKGGELFNKVAKGRLKEEMARKYFQQLISAVSFCHFRGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAP 196          
The following BLAST results are available for this feature:
BLAST of CB290389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPKP_ARATH1.198e-7274.32CBL-interacting serine/threonine-protein kinase 25... [more]
CIPK5_ARATH1.729e-7174.03CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKG_ORYSJ1.467e-6262.90CBL-interacting protein kinase 16 OS=Oryza sativa ... [more]
CIPKI_ORYSJ7.283e-6264.44CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPK6_ARATH3.060e-6064.94CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPKF_ARATH3.996e-6064.44CBL-interacting serine/threonine-protein kinase 15... [more]
CIPK5_ORYSJ3.996e-6062.22CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPKK_ARATH3.383e-5963.89CBL-interacting serine/threonine-protein kinase 20... [more]
CIPK2_ORYSJ1.286e-5863.69CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKJ_ARATH2.864e-5858.12CBL-interacting serine/threonine-protein kinase 19... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bb08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bb08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290389 ID=CB290389; Name=CB290389; organism=Citrus sinensis; type=EST; length=776bp
CGTAAACACAAACCAGACACAAAACCAAGTGCCCAAAAATCAACACCCCA
TTGAAAAGGAAGAGAAAAGCTTTGATCAAACACCCACTTCATGGAATCAA
TTCAAATCTGCATAACCGCAGTCCTTTCTTGGATCCCCTTATCGCAGTAT
TATTATCATAATTGATAATTCATAGGGATACAATTATAGTCCTGATTCAA
AAGACAAAATTCTAATTTCTTGAGAGAGAGACACATGGAAGAGGAGAGGC
ATGTTCTTTTCGGAAAGTACGAGATGGGGAGGTTATTAGGCAAGGGCACG
TTCGCGAAAGTGTATTACGGGAAGCAGCTGATGACAGGGGAGAGCGTGGC
GATCAAAGTGATCAACAAGGATCAATTGAAGAAGGAATTCATGATGGAGC
AGATCAAGCGAGAAATCTCTGTCATGAGATTAGTCCGCCACCCGAATGTC
GTCGAGTTGAGAGAAGTTATGGCCACCAAGAAGAAGATCTTTGTTGCCAT
GGAGTACGTCAAAGGTGGCGAGCTCTTCGCCAAAGTCGCCAGAGGCAGGC
TAAGGGAGGATCTCGCGAGGAAGTATTTCCAACAACTCATCAGTGCCGTC
GATTTCTGCCACAGCAGGGGAGTCTCTCACCGTGACCTGAAGCCGGAGAA
TCTGTTGTTGGACGAGAATGAGGATCTAAAGATCTCTGACTTTGGCCTCT
CTGCTCTCCCCGAGCAGCTGCGAAACGACGGCCTTCTGCACACCCAGTGT
GGGACTCCTGCTTACGTGGCGCCGGA
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