CB290403

Overview
NameCB290403
Unique NameCB290403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12025 contig Csv1_Contig12025:829..1736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: Y4UB_RHISN (Uncharacterized aminotransferase y4uB OS=Rhizobium sp. (strain NGR234) GN=NGR_a01380 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.004e-53
Identity = 102/256 (39.84%), Postives = 159/256 (62.11%), Query Frame = -3
Query:  148 RLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNIMMSPPFIMSPAEVDELISKYGKALKATEERV 906
            R A  L+++I   GP+ + AFIAEPV+G GG+ PPP  Y+E +QAV+KK+D+L IADEVI  FGR G+MFG   Y I+PDL++ AK L+SAY P+ A +V  +V +V+   ++ +G+FSHG+TYSGHP+  A A   L I ++ ++     ++   FQ  +K  F+  PI+GE+RG GL+   EF  ++   + F P   +GA         G++ R    GD +  +PP + +  EVDE+++   KA+++  + +
Sbjct:  205 RRAAELDEMIETLGPDNVGAFIAEPVLGTGGITPPPEGYWEAIQAVLKKHDVLLIADEVITGFGRTGSMFGSQHYGIEPDLITVAKGLTSAYFPLSASIVGEKVYKVLEDGADRVGAFSHGYTYSGHPIGAAAANAVLDIVEKEDLPGNAREVGGYFQAQLKEKFAQLPIVGEVRGVGLMGAIEFVGDRENKKRFDPLLKVGARVSKAARDRGLIARAMPHGDILGFAPPLVTTKEEVDEIVAMAEKAVRSVMDEL 460          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: YODT_BACSU (Uncharacterized aminotransferase yodT OS=Bacillus subtilis GN=yodT PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.416e-41
Identity = 95/263 (36.12%), Postives = 148/263 (56.27%), Query Frame = -3
Query:  142 AKNLEDLILKEGPETIAAFIAEPVMGAGGV-IPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMSPPFIMSPAEVDELISKYGKALKATEERVKE 900
            A  L+ +I + G + IA F+AEP++GA G  I PP  Y+E++  V + +D+LFIADEV+   GR G M   + +   PD+    K L + Y PI A +VS  + E I   S  + S   G TYS HP S   A+E L+   +  +++Q  K     +  + +A S S IIGE+RG GL+LG EF  ++   + FPPE  I     ++ +K G++V  S        GD ++++PPF +S  E++ELIS + + + A E+ +K+
Sbjct:  184 ADELDTMIKRIGSQFIAGFVAEPIIGAAGAAITPPPGYYERLSEVCRTHDVLFIADEVMTGLGRTGRMLATEHWDTVPDIAVLGKGLGAGYAPIAAAVVSDSIIETIKQGSGVIMS---GHTYSAHPYSAKAALEVLRYVLKHGLIKQSEKKGAVLKKKLDEAASQSGIIGEVRGKGLLLGIEFVADQKTKKVFPPEQAITQLIVSEAKKRGLIVYPSKAGIDSGEGDAVIIAPPFTISDGEMEELISIFSETVAAVEKNLKK 443          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: YGD3_SCHPO (Uncharacterized aminotransferase C1771.03c OS=Schizosaccharomyces pombe GN=SPBC1773.03c PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.488e-40
Identity = 89/259 (34.36%), Postives = 139/259 (53.67%), Query Frame = -3
Query:  160 RLAKNLEDLILKEGPETIAAFIAEPVMGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV--------RVSGDNIMMSPPFIMSPAEVDELISKYGKALKAT 906
            RLAK LED IL+ GPE +AAF+AE V GA  G   P   YF+ ++ V  KY ++F  DEV+   GR GTM   ++  + PD+ S AK L   Y PI   LV   +  V   +   +  F   FTY  HP++C+ A+    I +  ++VE+  ++     + + + F   P +G IRG GL  G E   +K+  E FPPE+ +G+       +HG+ V           GD+++++PP+I++  ++DEL+    K + +T
Sbjct:  199 RLAKELEDEILRVGPEKVAAFVAETVSGACTGCATPVPGYFKAMRKVCDKYGVIFYLDEVMSGIGRTGTMHAWEQEGVTPDIQSIAKCLGGGYQPISGALVGHRIMNVFEQKDAAMAGF---FTYQAHPIACSAALAVQTILRRDHLVERAAEMGKYLSEKLHETFDSHPNVGNIRGRGLFWGLEIVKDKATKECFPPEYKVGSLANKIGCEHGVFVYPGMGTIDGTRGDHVLLAPPYIITREQIDELVEALSKTITST 454          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: TPA_BILWA (Taurine--pyruvate aminotransferase OS=Bilophila wadsworthia GN=tpa PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.991e-36
Identity = 81/261 (31.03%), Postives = 145/261 (55.56%), Query Frame = -3
Query:  151 RLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV-------RVSGDNIMMSPPFIMSPAEVDELISKYGKALKATEER 906
            ++AK LE++IL  GP+ + A I EP+   GG++ PPA Y+E ++ +  KY++L I DEV+C  GR G  FG   ++++PD+V+ AK ++S Y PI   + + +V  + ++  ++T   F    T+ G     A A+  ++I +  N++E   K+  +  +G+K   +  PIIG++RG GL  G E   +++  EP   E    A  GA  ++ G+L+       R   + + + P  I + A++DE+++   KA    E++
Sbjct:  195 KMAKQLEEVILTVGPDELGAVIVEPMTAGGGILVPPAGYYETIREICDKYELLLIIDEVVCGLGRTGKWFGYQHFNVQPDIVTMAKGVASGYAPISCTVTTEKVFQDFVNDPADTDAYFRDISTFGGCTSGPAAALANIEIIERENLLENCTKMGDRLLEGLKGLMAKHPIIGDVRGKGLFAGIEIVKDRATKEPI-AEAVANAMVGA-AKQAGVLIGKTSRSFREFNNTLTLCPALIATEADIDEIVAGIDKAFTTVEQK 453          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: BIOK_BACSU (Lysine-8-amino-7-oxononanoate aminotransferase OS=Bacillus subtilis GN=bioK PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.516e-35
Identity = 80/238 (33.61%), Postives = 128/238 (53.78%), Query Frame = -3
Query:  169 ILKEGPETIAAFIAEP-VMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPAEVDELISKYGKAL 879
            +L+E  E IAA   E  V GA G+I  P  Y   V+ +   YD+L I DEV   FGR G MF C+  +++PDL++  K ++  Y+PI     + ++ +  +     L +F HG +Y+G+ + CAVA+E L +++  NIVEQV + + K    ++     P +G+IR  G + G E   +K   EP+P +  IG     +  + GML R  GD I   PP   +  E+ E+++   +A+
Sbjct:  203 LLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLPPLASTAEELSEMVAIMKQAI 440          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: YHXA_BACSU (Uncharacterized aminotransferase yhxA OS=Bacillus subtilis GN=yhxA PE=3 SV=4)

HSP 1 Score: 149.828 bits (377), Expect = 1.981e-35
Identity = 74/244 (30.33%), Postives = 137/244 (56.15%), Query Frame = -3
Query:  190 AKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-------IMMSPPFIMSPAEVDELI 900
            A  ++ ++  E  ETIA  I EP++  GG++ PP  Y +KV+ + +++  L I DEVIC FGR G  FG   Y +KPD+++ AK ++SAY+P+ A  V  ++ E    ++     F H  T+ G P +CA+A++ L+I ++  ++++   +  K    ++A  + P +G++RG GL++G E   +K   E  P +        A C++ G+++  +GD        I ++PPF ++  ++  ++
Sbjct:  200 ANEIDRIMTWELSETIAGVIMEPIITGGGILMPPDGYMKKVEDICRRHGALLICDEVICGFGRTGEPFGFMHYGVKPDIITMAKGITSAYLPLSATAVKRDIFEAYQGEA-PYDRFRHVNTFGGSPAACALALKNLQIMEDEQLIQRSRDLGAKLLGELQALREHPAVGDVRGKGLLIGIELVKDKLTKE--PADAAKVNQVVAACKEKGLIIGKNGDTVAGYNNVIQLAPPFCLTEEDLSFIV 440          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: OAPT_PSEPU (Omega-amino acid--pyruvate aminotransferase OS=Pseudomonas putida PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.587e-35
Identity = 81/247 (32.79%), Postives = 128/247 (51.82%), Query Frame = -3
Query:  169 LAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT--LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPAEVDELISKYGKAL 903
            LA  L  LI       IAA   EP+ G+ GV+ PP  Y ++ + +  +++IL + DEVI  FGR G+MFG D + + PDL+  AK +++  +P+GA++ S E+ +   +Q        F HG+TYS HPV+CA  + AL + ++ N+V+ V ++AP F+  +     +  + +IR  GL    + A         P E G+  +      K G  VR  GD +   P F   P ++D L    G+ L
Sbjct:  204 LADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW------KAGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEVL 444          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: BIOA_AQUAE (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Aquifex aeolicus GN=bioA PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.830e-35
Identity = 76/252 (30.16%), Postives = 133/252 (52.78%), Query Frame = -3
Query:  148 LAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPAEVDELISKYGKALKATEERV 903
            L K LED ILK   + +A  +   +  A G++P P  + + V+ + KKYD L I DEV   FGR GTMF C++  + PD +   K ++  Y+P+ A L + EV      +      F HG TY+G+ ++C+VA+  L++++E   +E++       ++ ++ F +   +G++R  G + G E   +K   EPFP     G     +C + G+ +R  GD +++  P ++   E++ +I     A+K  E+ V
Sbjct:  203 LLKQLED-ILKSREDIVAVIMEAGIQAAAGMLPFPPGFLKGVRELTKKYDTLMIVDEVATGFGRTGTMFYCEQEGVSPDFMCLGKGITGGYLPLAATLTTDEVFNAFLGEFGEAKHFYHGHTYTGNNLACSVALANLEVFEEERTLEKLQPKIKLLKERLQEFWELKHVGDVRQLGFMAGIELVKDKEKGEPFPYGERTGFKVAYKCREKGVFLRPLGDVMVLMMPLVIEEDEMNYVIDTLKWAIKELEKEV 453          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: BIOA_BACSH (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Bacillus sphaericus GN=bioA PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.162e-33
Identity = 70/235 (29.79%), Postives = 125/235 (53.19%), Query Frame = -3
Query:  190 LEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD-GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPAEVDELI 891
            +ED +     E  A  I   +  A G+   PA Y  +++ +  +YD+  IADE+   FGR GT+F C++ +I PD +  +K L+  Y+P+  ++ + +V +  +    T+ +F H  +Y+G+ ++C VA+E L I++E   ++ V     + +   ++AFSD P +GE R  G +   E   N+   EP P E  IG     +    G+L+R  G+ +   PP+I++  E+  +I
Sbjct:  205 VEDQLRMHHKEITAVIIEPLIQAAAGMKMYPAIYLRRLRELCTQYDVHLIADEIAVGFGRTGTLFACEQANISPDFMCLSKGLTGGYLPLSVVMTTNDVYQAFYDDYATMKAFLHSHSYTGNTLACRVALEVLAIFEEEQYIDVVQDKGERMRKLALEAFSDLPFVGEYRQVGFVGAIELVANRDTKEPLPSEERIGYQIYKRALAKGLLIRPLGNVLYFMPPYIITDDEMQFMI 439          
BLAST of CB290403 vs. ExPASy Swiss-Prot
Match: BIOA_METJA (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Methanocaldococcus jannaschii GN=bioA PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.017e-31
Identity = 71/246 (28.86%), Postives = 123/246 (50.00%), Query Frame = -3
Query:  157 LILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK----PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPAEVDELISKYGKALKATE 882
            LI K   E     +   +MG+ G+IP P  Y E V    K+ D++FI DEV   FGR G MF CD   +K    PD++   K L+  Y+P+ A L + E+      +        HG TY+G+ + C+ A+  L+I+++ N++E +      F   ++   +   +G++RG G ++G E   +K   EP+P  +  G     +  + G+ +R  G+ I++ PP  ++  E+  L     +A+K  +
Sbjct:  215 LIEKHAEEVFCVILEGGIMGSAGMIPYPDGYIEGVAKACKENDVIFILDEVATGFGRTGKMFFCDNEELKKLEKPDILCLGKGLTGGYLPLAATLTTDEIYNQFLGEFGESKQLYHGHTYTGNQLLCSAALATLEIFEKENVIENIQPKIKLFHKELRKLKELEHVGDVRGRGFMVGIELVKDKETKEPYPYGYKAGYRVAEKLLEKGIYMRPIGNVIILVPPLSITEKEIIYLCDALYEAIKEAD 460          
The following BLAST results are available for this feature:
BLAST of CB290403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 435
Match NameE-valueIdentityDescription
Y4UB_RHISN8.004e-5339.84Uncharacterized aminotransferase y4uB OS=Rhizobium... [more]
YODT_BACSU1.416e-4136.12Uncharacterized aminotransferase yodT OS=Bacillus ... [more]
YGD3_SCHPO3.488e-4034.36Uncharacterized aminotransferase C1771.03c OS=Schi... [more]
TPA_BILWA3.991e-3631.03Taurine--pyruvate aminotransferase OS=Bilophila wa... [more]
BIOK_BACSU1.516e-3533.61Lysine-8-amino-7-oxononanoate aminotransferase OS=... [more]
YHXA_BACSU1.981e-3530.33Uncharacterized aminotransferase yhxA OS=Bacillus ... [more]
OAPT_PSEPU2.587e-3532.79Omega-amino acid--pyruvate aminotransferase OS=Pse... [more]
BIOA_AQUAE9.830e-3530.16Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
BIOA_BACSH3.162e-3329.79Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
BIOA_METJA1.017e-3128.86Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290403 ID=CB290403; Name=CB290403; organism=Citrus sinensis; type=EST; length=908bp
TTTTTTTTTTAGGCAATGCTTTATTGAAGCATCGGAAATTTCAAACGTCA
CAGAAGAGGAAAAAAATATTTGCTTTACATACAAGTCTTACAGTTTTTTT
TCATCAATATCAGCCATTACAATTTACTGCTGGGACTTGAGTTCCTTCAC
CCTCTCCTCGGTCGCCTTCAGTGCCTTCCCATATTTGCTTATTAACTCAT
CAACCTCTGCAGGGGACATTATAAATGGAGGAGACATCATAATGTTGTCA
CCTGAAACACGTACTAACATTCCGTGCTTTTCGCACTGTGCTCCAAAATA
TGCACCTATCCCCCATTCAGGAGGGAACGGTTCATTTGGAGACTTGTTGT
CTGCAAACTCTGTACCAAGAATCAAACCAGTGCCCCGAATCTCTCCAATG
ATGGGACTATCAGAAAAGGCTTTTACACCATCTTGAAACTTTGGCGCTAT
CTTATTTACTTGCTCAACAATATTTCTTTCCTTGTAAATCTTAAGCGCTT
CGATGGCAACGGCACAGGAAACAGGATGCCCAGAATAAGTAAATCCATGA
GAGAAAGAACCAAGTGTGTTGCTTTGAGAGTGAATGACTTCTGAAACTTC
GGGACTCACAAGAATAGCTCCAATGGGCATATATGCTGAAGAAAGGGCCT
TTGCGAAGGACACAAGATCTGGTTTAATGCTGTATTTGTCACAACCAAAC
ATTGTGCCAAGTCTTCCAAATGCACAAATTACCTCATCTGCTATAAAAAG
GATGTCATATTTTTTTACAACAGCTTGAACCTTCTCAAAATAAGTCGCAG
GAGGAGGTATCACGCCTCCTGCCCCCATGACAGGCTCAGCAATAAATGCA
GCAATCGTCTCTGGTCCCTCTTTGAGAATGAGATCCTCTAAATTTTTGGC
TAATCTGG
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