CB290404

Overview
NameCB290404
Unique NameCB290404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12025 contig Csv1_Contig12025:21..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: Y4UB_RHISN (Uncharacterized aminotransferase y4uB OS=Rhizobium sp. (strain NGR234) GN=NGR_a01380 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32
Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 782
            P ++E  +G  + D  G + +D  +GL+C  +G     +  A + Q   L +YHS+   TT     L+  L++M    KM+KVF+  SGS+AN+TQ KLVWYYNN  G+P KKK I+R++ YHG ++++ S++G+   H   DLP P + HT  PH++  A+P
Sbjct:   34 PTIVETGKGIRIQDARGNQLIDGFAGLYCVNVGYGRTEVAEAISRQAYRLAYYHSYAAHTTDELAILSDRLVKM-APGKMSKVFYGMSGSDANETQAKLVWYYNNLRGKPTKKKIISRERGYHGCSVVSGSMTGMSFYHDHMDLPLPQICHTGVPHHYWGANP 195          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: YHXA_BACSU (Uncharacterized aminotransferase yhxA OS=Bacillus subtilis GN=yhxA PE=3 SV=4)

HSP 1 Score: 107.457 bits (267), Expect = 8.825e-23
Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 3
Query:  297 LVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 770
            L+ +K+EG++V D +G++YLD++SGLWC  +G     L  AA  QL  LP+Y     ++  P++ LA++L E      +  +FF+NSGSEAN+T  K+   Y+   G  ++ KFI+R ++YHG+TL A S +G      K++  +   LH   P  +R
Sbjct:   36 LIAQKAEGAWVTDTDGRRYLDAMSGLWCVNIGYGRKELAEAAYEQLKELPYYP--LTQSHAPAIQLAEKLNEWLGGDYV--IFFSNSGSEANETAFKIARQYHLQNGDHSRYKFISRYRAYHGNTLGALSATGQAQRKYKYEPLSQGFLHAAPPDIYR 189          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: BIOK_BACSU (Lysine-8-amino-7-oxononanoate aminotransferase OS=Bacillus subtilis GN=bioK PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20
Identity = 55/173 (31.79%), Postives = 93/173 (53.76%), Query Frame = 3
Query:  258 PFTAGWQSTDVHPLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL--------PALHQKFDLPAPFVLHTD 752
            PFT   +  D +PL+IE   G  V DINGK+Y D  S +W    G  +  L  A   QL  +  + +    T  P+  LA+ L+++ +  K+ +VF+++SG+EA +  +K+ + Y   +G+P K+KFIA +  YHG T+ A S+  +        P + + +  P P+V  ++
Sbjct:   16 PFTQ-MKDYDENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIA-HSTLLGMTNVPATQLAETLIDI-SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSE 185          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: BIOA_BACSH (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Bacillus sphaericus GN=bioA PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.731e-19
Identity = 52/152 (34.21%), Postives = 90/152 (59.21%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT 749
            P+VI+K EG ++YD   ++YLD++S  W    G + PR+  A + Q  TL  +  F N + +P++ LA++L+ + T   + KVFF ++GS A +  +K+ + Y+   G+  KK+F+A   +YHG TL A S+ G+   ++ +    P +L T
Sbjct:   31 PIVIKKGEGVWLYDEQNQRYLDAVSSWWVNLFGHANPRISQALSEQAFTLE-HTIFANFSHEPAIKLAQKLVAL-TPQSLQKVFFADNGSSAIEVALKMSFQYHMQTGKTQKKRFLALTDAYHGETLGALSVGGVDLYNEVYQ---PLLLDT 177          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: BIOA_AQUAE (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Aquifex aeolicus GN=bioA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.722e-18
Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  258 PFTAGWQSTDVHPLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH--------QKFDLPAPFV 740
            PFT      +   L+ E+ EG Y++DI G+KY+D++S LWC   G + P+L  A   QL  +  + +    +  P++ LAK+L+E+ +   + KVF++  G+EA +  +K+ ++Y    G   K  FI   ++YHG T+ A S+ G+   H        +   LP+P++
Sbjct:   20 PFTQMKVYREEENLIFERGEGVYLWDIYGRKYIDAISSLWCNVHGHNHPKLNNAVMKQLCKVA-HTTTLGSSNVPAILLAKKLVEI-SPEGLNKVFYSEDGAEAVEIAIKMAYHYWKNKGVKGKNVFITLSEAYHGDTVGAVSVGGIELFHGTYKDLLFKTIKLPSPYL 186          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: BIOA_METJA (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Methanocaldococcus jannaschii GN=bioA PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = 3
Query:  258 PFTAGWQSTDVHPLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 770
            P+T   +  +   L+IE+ EG+Y+ DI G KYLD++S +WC   G S   ++ A   Q + +  + +       PS+ LAK+L+++ T   + KVF++  G+EA +  +K+ + Y    G   + KFI+ ++ YHG T+ A S+ G    H  F        H + P+ +R
Sbjct:   19 PYTQMKEYRESKNLIIERGEGNYLIDIYGNKYLDAVSSIWCNLFGHSRKEIIEAIKNQADKI-CHSTLLGCGNVPSILLAKKLVDI-TPKHLTKVFYSEDGAEAVEIAIKMAYQYYVLRGDKGRTKFISVKEGYHGDTVGAMSVGGSELFHGVFKPLLFKGYHANPPYCYR 187          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_MYXXA (Acetylornithine aminotransferase OS=Myxococcus xanthus GN=argD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.458e-17
Identity = 54/149 (36.24%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD-LPAPF 737
            P V+ + +G+ V+D++G++YLD + G+   ALG   P +VAAA AQL++L  +H      ++P +DLA +L E    S +++ FF NSG+EAN+  +KL        G P + + I+   S+HG TL   + +G     + F+ LPA F
Sbjct:   38 PFVLARGQGARVWDMDGREYLDLIGGIATCALGHCHPEVVAAAKAQLDSL--WHVSNVFYSQPQIDLAAQLTEW---SGLSRAFFCNSGAEANEALLKLTRKVMKDRGTPERFEVISFDSSFHGRTLATVTATGQAKYQKGFEPLPAGF 181          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_SALPK (Succinylornithine transaminase OS=Salmonella paratyphi A (strain AKU_12601) GN=astC PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.242e-17
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746
            PL+  + EGS ++D  GK+Y+D   G+   ALG + P L  A   Q N   F+H+    T +P+L LAK+L++   A+   +VFF NSG+EAN+  +KL   Y +     +K   +A + ++HG TL   S  G P   Q F    P + H
Sbjct:   22 PLIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQANR--FWHTGNGYTNEPALRLAKKLID---ATFAERVFFCNSGAEANEAALKLARKYAHDRVGNHKSGIVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRH 167          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ASTC_SALPA (Succinylornithine transaminase OS=Salmonella paratyphi A GN=astC PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.242e-17
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 3
Query:  294 PLVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 746
            PL+  + EGS ++D  GK+Y+D   G+   ALG + P L  A   Q N   F+H+    T +P+L LAK+L++   A+   +VFF NSG+EAN+  +KL   Y +     +K   +A + ++HG TL   S  G P   Q F    P + H
Sbjct:   22 PLIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQANR--FWHTGNGYTNEPALRLAKKLID---ATFAERVFFCNSGAEANEAALKLARKYAHDRVGNHKSGIVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRH 167          
BLAST of CB290404 vs. ExPASy Swiss-Prot
Match: ARGD_XANCP (Acetylornithine aminotransferase OS=Xanthomonas campestris pv. campestris GN=argD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.242e-17
Identity = 57/150 (38.00%), Postives = 92/150 (61.33%), Query Frame = 3
Query:  297 LVIEKSEGSYVYDINGKKYLDSLSGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRP-NKKKFIARQKSYHGSTLIAASLSGLPALHQKFD-LPAPF 737
            +V+E+ +GS V+D  G++YLD  SG+  + LG ++P L+AA T Q   L  +H+     + P L LA+EL+   TAS+ A KVF  NSG+EAN+  +KLV  + ++ GRP +K+  +  + S+HG TL + + +  P   + ++ LP  F
Sbjct:   24 VVLERGQGSRVWDDQGREYLDLSSGIAVSGLGHNDPDLMAALTEQAGKL--WHTSNVFFSAPPLKLAEELV---TASRFAQKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGF 168          
The following BLAST results are available for this feature:
BLAST of CB290404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
Y4UB_RHISN2.096e-3239.26Uncharacterized aminotransferase y4uB OS=Rhizobium... [more]
YHXA_BACSU8.825e-2337.34Uncharacterized aminotransferase yhxA OS=Bacillus ... [more]
BIOK_BACSU9.133e-2031.79Lysine-8-amino-7-oxononanoate aminotransferase OS=... [more]
BIOA_BACSH7.731e-1934.21Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
BIOA_AQUAE1.722e-1831.36Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
BIOA_METJA2.249e-1830.99Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
ARGD_MYXXA1.458e-1736.24Acetylornithine aminotransferase OS=Myxococcus xan... [more]
ASTC_SALPK4.242e-1735.76Succinylornithine transaminase OS=Salmonella parat... [more]
ASTC_SALPA4.242e-1735.76Succinylornithine transaminase OS=Salmonella parat... [more]
ARGD_XANCP4.242e-1738.00Acetylornithine aminotransferase OS=Xanthomonas ca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bc06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bc06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290404 ID=CB290404; Name=CB290404; organism=Citrus sinensis; type=EST; length=783bp
GAACAGCTAAAACCGGGGAAAAAAAAAAAACACTCCGCCTTTGTTGCATG
TTAAGAGCAAAAATGGTGACCAGCAAGCTCCTTCAATCATCCCTCAAATC
CCAGATTGGTTCATTTACAAAGCATTTTTCTGCTTCCAAAAGTTTGTCGG
AGAACTTGTATCAAATCCCTTTGCTTGCCAGGTTCTATGGTACAGATGCG
TCTTTGCAAAAGGAAGATTCAACCACTAATGGGTTTAAGGGGCATGATAT
GCTGGCACCTTTCACAGCTGGGTGGCAGAGTACTGATGTGCATCCACTGG
TTATAGAAAAGTCTGAGGGTAGTTATGTTTACGACATCAATGGGAAGAAG
TATCTTGATTCTCTTTCTGGCCTATGGTGCACAGCCCTAGGGGGGAGTGA
ACCTCGCCTTGTGGCTGCTGCTACTGCACAATTGAATACCCTGCCATTTT
ACCACTCCTTCTGGAATCGTACCACAAAACCTTCTCTGGATCTTGCAAAG
GAGCTTTTAGAAATGTTTACCGCAAGTAAAATGGCCAAGGTTTTCTTTAC
TAATAGTGGATCAGAAGCCAATGACACTCAGGTCAAGCTGGTTTGGTATT
ACAATAATGCTCTTGGAAGACCAAACAAGAAGAAATTTATTGCACGACAA
AAATCGTACCATGGTTCAACTTTGATTGCAGCTAGTCTTTCTGGTCTTCC
AGCTTTGCACCAAAAATTTGATCTGCCGGCTCCCTTTGTATTGCACACTG
ACTGCCCTCATTATTGGCGCTACGCTCATCCAG
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