CB290427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.712e-88 Identity = 174/259 (67.18%), Postives = 193/259 (74.52%), Query Frame = 2 Query: 29 STFWQNKLLQQKQFLV-PVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAV------PGAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 S F K Q+ QF + P R + R ++GV VAA+SEDLVK S V EK VKFKVRAV TV+ KEDFKETLV DA T+KIGRNVVLEL+ T+VDP+T PKKS+ AVLKDWSKKSN KAERVHYTAEF VDS FG+PGAITV NKHQKEFFLE+ITIEGFACGPVHF CNSWVQS KDH KRI F NQPYLPSETP+GLR LREKEL+++RG GKG RKLSDRIYDYDVYND+ Sbjct: 26 SRFSIKKKTQRTQFSINPFDPRPM--RAVNSSGV-------VAAISEDLVKTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDFKETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDI 275
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.148e-85 Identity = 164/252 (65.08%), Postives = 184/252 (73.02%), Query Frame = 2 Query: 47 KLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKP------VKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 K Q QF + RR K+G VAA+SEDLVK S G + VKFKVRAV+TV+ KED KETLV DA +KIGRN+VLEL+ T++DP+TK PKKS AVLKDWSKKS KAERVHYTAEF VD+ FG+PGAITV NKHQKEFFLE+ITIEGFA GPVHF CNSWVQS KDH KRIFF NQPYLP+ETP+GLR LREKELK++RG G GVRKLSDRIYD+DVYNDL Sbjct: 28 KRTQSTQFSINPFDRRPRKTKSGV----------VAAISEDLVKTLRFSTTTGDRKSEEEEKAAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYNDL 269
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 4.501e-67 Identity = 129/221 (58.37%), Postives = 160/221 (72.40%), Query Frame = 2 Query: 149 VAALSEDLVKGAASSAVP----GAAEK---PVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIE--GFACGPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 VAA+SE++ + AAS + GA E+ P K +RA LTV++ KED KE + DAL + +GRNVVLEL+ T++ PRTK P +S +KDW +K K + V YTAEF VD++FG PGAI VAN+H +EFFLE+I +E G CGPVHF CNSWVQST++ KR+FF+N+PYLPSETP GLR LREKELKD+RG G GVRKLSDRIYDY YNDL Sbjct: 45 VAAISEEVPRLAASPSSGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGDHVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDL 265
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.355e-63 Identity = 122/237 (51.48%), Postives = 159/237 (67.09%), Query Frame = 2 Query: 110 AGAAGVRRGINN--------PVAALSEDLVKGAASSAVPGAAEKPV----KFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 AG+ G+ +G + PV AL E +V A A +P RAV+TV++ KED K+ Q DAL +++GR+V+LELV TE DPR PKKS+ + L W K +VKAERV YTAEF VD+ FG PGA+TV N+HQ+EF++E+I +EGF GP HF CNSWVQ T+ +R+FF+N+PYLPSETP GLR LR +EL D+RG G G R+++DR+YDYDVYNDL Sbjct: 15 AGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRPEAHPQSVAARAVVTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYNDL 251
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.726e-34 Identity = 99/246 (40.24%), Postives = 132/246 (53.66%), Query Frame = 2 Query: 59 QKQFLVPV--QQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFK-VRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAER-VHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 +KQ VP+ Q R V SR+ A G + L SS P K K V AV+ ++K IKE E +Q + + IG+ ++++LV E+DP T +KS E+ + K VK R + +TA+F V NFG PGAI V N E L I IE + + F N+W+ S D+ RI F +QP LPSETP G++ LREK+L +RG GKG RK +RIYDYDVYNDL Sbjct: 28 RKQHRVPISRQVRAVISREEKAVDQEDGKKSTNKPLIN-------SSQFPWQRSKYTGSKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGMLIQLVSEEIDPETGKGRKSLESPVMGLPKA--VKDPRYLVFTADFTVPINFGKPGAILVTNLLSTEICLSEIIIED-STDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDVYNDL 263
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.400e-30 Identity = 74/201 (36.82%), Postives = 111/201 (55.22%), Query Frame = 2 Query: 212 EKPVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGT-EVDPRT-KGPKKSREAVLKDWSKK--SNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGP-----VHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVR-KLSDRIYDYDVYNDL 784 +K K+ + V K DFK+ + + D + E +GR V L L+ + + DP K + + A L+ W K ++V AE + F D + G P A + N H +F+L+++T+ GF G +HF CNSW+ + R+FF+N+ YLPSETP ++ LRE+ELK++RG KG K DR+YDY YNDL Sbjct: 28 KKTTTMKIEGEVVVMKKNLLDFKDVMASLLDRVNELLGRRVSLHLISSHQPDPANEKRGRLGKAAHLEKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDL 228
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.400e-30 Identity = 76/198 (38.38%), Postives = 111/198 (56.06%), Query Frame = 2 Query: 203 GAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKS--REAVLKDW-SKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGF-ACGPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 G E K V+ +KKN+ DF + + D L E +G + L LV ++V G K + A L+DW + +++ A + F +++FG PGA + N H EF L+++T+E G VH+ CNSW+ K ++ R+FF+N+ YLP ETPA L RE+EL +RGTG+G K DR+YDY YNDL Sbjct: 12 GGNETTTKKVKGTVVLMKKNVL-DFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWDRVYDYAYYNDL 208
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30 Identity = 77/189 (40.74%), Postives = 104/189 (55.03%), Query Frame = 2 Query: 230 KVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKG--PKKSREAVLKDWSKK-SNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 KV+ + + K DF + + D + E +G+ V +L+ + G K S A L+++ + + A + F + FG PGA + N H EFFL+++T+E G VHF CNSWV + + RIFFANQPYLPSETP LR RE EL +RG G G R+ DRIYDYDVYNDL Sbjct: 18 KVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQSDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWNEEFGVPGAFVIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFANQPYLPSETPELLRKYRENELVTLRGDGTGKREAWDRIYDYDVYNDL 206
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.852e-29 Identity = 88/219 (40.18%), Postives = 124/219 (56.62%), Query Frame = 2 Query: 152 AALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITI---EGFACGPV-HFQCNSWVQ--STKDHS--GKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 A+ S +G +SS + AA +V+AV T+K + E L+N+ + + IGR++ LELV +E+D +T K + + + + V Y A+F V S FG GAI V N+ ++E FLE I + +G V +CNSWVQ S D KRIFFAN+ YLP +TPAGLR+ R+ +L+ RG G G R+ DR+YDYDVYNDL Sbjct: 63 ASSSATASRGDSSSDMAAAAA----VRVKAVATIKVTVGE-----LINRSIDIRDLIGRSLSLELVSSELDAKTGKEKATVRSYAHNVDDDDH---SVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYNDL 269
BLAST of CB290427 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.852e-29 Identity = 79/190 (41.58%), Postives = 110/190 (57.89%), Query Frame = 2 Query: 224 KFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVG-TEVDPRTKGPKKSREAVLKDWSKK-SNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHSGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 784 K K VL K ++ + + V+ +A +GR+V L+L+ T+ D KG K ++ L+ + + A + F D + G PGA + N Q EFFL+++T+E + G + F CNSWV +TK + RIFFAN Y+PSETPA L + RE+ELK +RG G G RK DRIYDYDVYNDL Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAF---LGRSVSLQLISATKADAHGKG-KVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDL 192 The following BLAST results are available for this feature:
BLAST of CB290427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290427 ID=CB290427; Name=CB290427; organism=Citrus sinensis; type=EST; length=786bpback to top |