CB290481

Overview
NameCB290481
Unique NameCB290481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig134 contig Csv1_Contig134:1..779. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CB290481 vs. ExPASy Swiss-Prot
Match: YCF19_GUITH (Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.512e-11
Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 2 
Query:  533 LNTPLTVVAAGLAKWLDIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLTF 757
            ++   T++ +    +L IY  +LL+RV L+WFPN+ W  QP  ++  + DPYL +FR I+PP+   +D+SP+L F
Sbjct:    1 MSNSFTLLFSSFIGFLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG-IDISPILGF 74
The following BLAST results are available for this feature:
BLAST of CB290481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCF19_GUITH4.512e-1140.00Uncharacterized protein ycf19 OS=Guillardia theta ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01bg06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bg06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290481 ID=CB290481; Name=CB290481; organism=Citrus sinensis; type=EST; length=779bp
GCCCTATGAAAATGGGAATGGTATTCGTGATTATTCGAAAATCTAATTTT
TCAACAAGAAACAACTTTAAAGTTTAAACAAAGATAAGCAACAATATAAG
AAAAGCATACAAGGTCTCCGTTATCTCCATAGCAAAAGCCAATCCACCTT
TGGTCTTCTCTGCTTTTCTAGCAAAACAATGGCTACAGGCGCCGCTCTAC
TATCCCTCCGTTCGCCGCCGTTTCTCTCAAACCCTAAAACCCTCCACCAA
TCTCCCTGCCGTGCCTCCCCCTCTTTCCTGCCCATCAAAGCCGCAGCCAC
ATCGTCATCCTCATCTCTCCCAACTTTACCCCTCAAGACCCCCAAAATCA
CACCTCTCTCCCCTCTGCTCAACGACTCAACTCGCACCGTCACCACCCTC
CTATCTCTCTCCGGATTTCTCCTCAAATTCGCCATCTCCAAAATCCCAAC
CCTCCCACAACCAACAACCAATTTGGTTCAGTCTGTGGGGCCCTTGTTCT
TCGCGGCTCTCCGTGAGCGCCCTAGCGGGAGCTTGAACACGCCGCTCACG
GTTGTGGCGGCGGGATTGGCCAAGTGGCTTGACATTTACAGTGGGGTTTT
GTTGGTTAGGGTTTTGCTGAGTTGGTTCCCCAACATTCCTTGGGAAAGGC
AGCCGCTTTCGGCCATTCGGGACTTGTGTGATCCTTATTTGAATCTCTTT
CGGAATATTATCCCCCCTGTTTTCGATACACTGGATGTCAGCCCCTTGTT
AACTTTCGCCGTTTTTGGGAACACTCGCC
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