CB290541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290541 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.532e-18 Identity = 63/153 (41.18%), Postives = 78/153 (50.98%), Query Frame = -2 Query: 388 NDGELGFKPFVPTADDTPLYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAFDNQVKFLPMPYPEGSWEASLDAFLNGD--NTQDGG-NLMNLWSFDDFPSTLGGVY 837 N+ + G V + YF+SDQGSNSFDCS+FGW +QAP TP+ISS A + S ANP KKLKS + F+ PY W+ASLD FLN D TQD G N M+LWS D+ S +GGV+ Sbjct: 237 NNNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCSEFGWSDQAPITPDISS---AVINNNNSALFFEEANPAKKLKS--------------------MDFET-------PYNNTEWDASLD-FLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 358
BLAST of CB290541 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.487e-16 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = -2 Query: 409 PFVPTADDT-PL---YFNSDQGSNSFDCSDFGWGEQAPKTPEISSV--LEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAFDNQVKFLPMPYPEGSWEASLDAFLNGDNTQDGGNLMNLWSFDDFP 813 PFVP + P+ NSDQGSNSF CSDFGW E KTP+I+S+ + EVDES F+ + NPM PV +N+ L D + ++FL +G+ + S+D+ LN D +QD + M+LWSFDD P Sbjct: 238 PFVPAMNSAAPIEDPIINSDQGSNSFGCSDFGW-ENDTKTPDITSIAPISTIAEVDESAFIKSSTNPM---------VPPVMENSAVDLPD----LEPYMRFL---LDDGAGD-SIDSLLNLDGSQDVVSNMDLWSFDDMP 360
BLAST of CB290541 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14 Identity = 61/156 (39.10%), Postives = 79/156 (50.64%), Query Frame = -2 Query: 394 GYLGSFPNDGELGFKPFVPTADDTPLYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAF-DNQVKFLPMPYPEGSWEASLDAFLNGDNTQDGGNLMNLWSFDDFPSTLGG 858 G SF G G++ YF+SDQGSNSFDCS+FGW + PKTPEISS+L +E+ FV+ N KKLK NS+ SD+L+A+ DN + P+ EA L A G TQ+ N + LWS D+ L G Sbjct: 255 GLTNSFDAGGNNGYQ-----------YFSSDQGSNSFDCSEFGWSDHGPKTPEISSMLVNN---NEASFVEE-TNAAKKLKPNSDE------------SDDLMAYLDNALWDTPLEV-----EAMLGADA-GAVTQEEENPVELWSLDEINFMLEG 377 The following BLAST results are available for this feature:
BLAST of CB290541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290541 ID=CB290541; Name=CB290541; organism=Citrus sinensis; type=EST; length=865bpback to top |