CB290542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 5.479e-50 Identity = 119/264 (45.08%), Postives = 154/264 (58.33%), Query Frame = 3 Query: 87 KPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE---TPAAAPKSSVKANS-QKSV--PKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEKPQV--NQYGYLGSFPNDGELGFKPFVPTADDTPLYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKSNSENA 806 KPF F+A K ++ V+ EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T IRG KAKVNFP+E + + + S K N+ QKSV P ++ VQ + + Y NNS + + ++S +EEKPQ+ NQ+G SF G G++ YF+SDQGSNSFDCS+FGW + PKTPEISS+L +E+ FV+ N KKLK NS+ + Sbjct: 78 KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSDQGSNSFDCSEFGWSDHGPKTPEISSMLVNN---NEASFVEE-TNAAKKLKPNSDES 326
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.051e-45 Identity = 116/246 (47.15%), Postives = 138/246 (56.10%), Query Frame = 3 Query: 87 KPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDET-PAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEKPQVNQYGYLGSFPNDGELGFKPFVPTADDTPLYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKS 791 KPF F++ K + GS K V A+KS RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T IRG KAKVNFP+E A + K SVKAN QK V K +P P+L QN + + N+ +EEK QV S N+ + G V + YF+SDQGSNSFDCS+FGW +QAP TP+ISS A + S ANP KKLKS Sbjct: 81 KPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPNP-SPALVQNSNI-------SFENMCFMEEKHQV-------SNNNNNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCSEFGWSDQAPITPDISS---AVINNNNSALFFEEANPAKKLKS 308
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.713e-40 Identity = 100/214 (46.73%), Postives = 126/214 (58.88%), Query Frame = 3 Query: 153 AKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEKPQVNQYGYLGSFPNDGELGFKPFVPTADD-TPL---YFNSDQGSNSFDCSDFGWGEQAPKTPEISSV--LEATPEVDESQFVDAVANPM 776 A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ IRGKKAKVNFP E P A K + + K+ PK+ + +P++ F+ L N++ Y + + KP V P++ PFVP + P+ NSDQGSNSF CSDFGW E KTP+I+S+ + EVDES F+ + NPM Sbjct: 108 AAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP-EAPTTAQKRRAGSTTAKA-PKSSVEQ-KPTVKPAFNNLANANAFVYPSANFTSNKPFVQ--------PDN-----MPFVPAMNSAAPIEDPIINSDQGSNSFGCSDFGW-ENDTKTPDITSIAPISTIAEVDESAFIKSSTNPM 304
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 65/153 (42.48%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 132 AVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD---------ETPAAAPKS--------------SVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILE 521 AVK + + RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT IRG KAK+NFPD P ++P+S S SQ S P C+ QN Y D D +S LE Sbjct: 60 AVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLE 212
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.001e-19 Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 156 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYL 476 ++ +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T IRG+KAK+NFP+ + N + + + + + L DY+ Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSEDLMALEDYM 145
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.432e-18 Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 3 Query: 168 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA-----AAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEE 524 ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT IRG KAK+NFP+E+ A V+ N + + A +S S +F + N+ + LE+ Sbjct: 18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPDTLLIDTQWLED 141
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.681e-17 Identity = 50/116 (43.10%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 96 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------DETPAAAPKSSVKANSQKSV 419 T S+ R+ S K E K +RK +KN YRG+RQRPWGK+AAEIRDP + RVWLGTF T RG +AK+NFP +P AA KA++ SV Sbjct: 104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASASASV 219
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.362e-16 Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 3 Query: 177 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEK-PQVNQYGY 551 RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ A+ S+ +Y ++++Q YY+N + P NQY Y Sbjct: 88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPP--------------------NYYSSNNQIYYSNPQTNPQTIPYFNQYYY 193
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.362e-16 Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = 3 Query: 126 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSV-----------KANSQKSVPKACLSPVQPSLNQN 464 +TA E + S ++ R+ +YRG+RQRPWGKWAAEIRDP K RVWLGTF+ RG KAK+NFP+ P S+ S+ S L P++P+ NQ+ Sbjct: 165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPASNQS 287
BLAST of CB290542 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.779e-16 Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 90 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 383 P +F+ SH + + +A R++K +YRG+RQRPWGKWAAEIRDP + RVWLGTF+T RG KAK+NFP++ P Sbjct: 45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPP 141 The following BLAST results are available for this feature:
BLAST of CB290542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290542 ID=CB290542; Name=CB290542; organism=Citrus sinensis; type=EST; length=829bpback to top |