CB290576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290576 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.374e-18 Identity = 72/255 (28.24%), Postives = 103/255 (40.39%), Query Frame = 1 Query: 82 TLDPDPQFGVSSKDITISQNPAISTRLYLPKLTQPHQKLAIL--------------VYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFE-RFFIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSESDGSDNYDQKKCLEYLIWEFVYPAAPGGIDNPMINPVGSGNPSL 801 T + +P GV S D+ I + + +R+Y P Q +IL ++FHG +F SA S + LV + + VS+ YR APE P AY+D W A WV N WL + D + F+ GDSSGGNI HN+A++AG+ +G+ +LG L +P F G+ SE Y W+ P ++P NP SL Sbjct: 54 TANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWV------------------------NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE----------SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDR-EHPACNPFSPRGKSL 273
BLAST of CB290576 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.288e-18 Identity = 74/251 (29.48%), Postives = 106/251 (42.23%), Query Frame = 1 Query: 97 PQFGVSSKDITISQNPAISTRLYLP------------KLTQP---HQKLAILVYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFERF-FIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSESDGSDNYDQKKCLEYLIWEFVYPAAPGGIDNPMINPVGSGNPSL 801 P GV S D + + TR+Y P +LT+P + + +L++FHG +F SA S + + LV+ V+ VS++YR +PE+ P AY+D W A WV S WL + D + ++ GDSSGGNI HN+A++A ++ GV++LG L HP F G SE Y W P D+P NP G SL Sbjct: 59 PLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS------------------------RVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNE----------GVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDR-DHPACNPFGPRGQSL 273
BLAST of CB290576 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.624e-17 Identity = 70/251 (27.89%), Postives = 105/251 (41.83%), Query Frame = 1 Query: 97 PQFGVSSKDITISQNPAISTRLY-----------LPKLTQP----------HQKLAILVYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFE-RFFIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSESDGSDNYDQKKCLEYLIWEFVYPAAPGGIDNPMINPVG 783 P GVSS D I Q+ + R+Y +T+P + ++++FHG +F SA S + V S+ + VS+ YR APE+ P AY+D W A +WV S +P++ + GD + R F+ GDSSGGNI H++A++A D+ GV++ G L + F G+ SE Y W+ Y D+P NP G Sbjct: 59 PLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS------------------------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE----------GVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWK-AYLPEDADRDHPACNPFG 274
BLAST of CB290576 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.635e-17 Identity = 71/249 (28.51%), Postives = 104/249 (41.77%), Query Frame = 1 Query: 94 DPQFGVSSKDITISQNPAISTRLYLPK----------LTQP--HQKLAILVYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFE-RFFIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSESDGSDNYDQKKCLEYLIWEFVYPAAPGGIDNPMINPVGSGNPSL 801 +P GV S D+ I + + +R+Y P L P + + ++V+FHG +F SA S + LV + VS+ YR APE P AY+D WA +WV N WL + D + R F+ GDSSGGNIVHN+A++A + + + +LG L +P F G+ SE Y W P ++P +P G + SL Sbjct: 58 NPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV------------------------NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE----------SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDR-EHPACSPFGPRSKSL 271 The following BLAST results are available for this feature:
BLAST of CB290576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290576 ID=CB290576; Name=CB290576; organism=Citrus sinensis; type=EST; length=804bpback to top |