CB290612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33 Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 M+LKLAC V+L CMV+GAP+AQ AVT GQVT+SL C+ CC+GIKSLNSAA TTP RQ+ C C+K+AA I +N LASGLP +CGVNIPY+ISPS DC+ V+ Sbjct: 5 MSLKLACVVVL-CMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33 Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 M+LKLAC V+L CMV+GAP+AQ AVT GQVT+SL C+ CC+GIKSLNSAA TTP RQ+ C C+K+AA I +N LASGLP +CGVNIPY+ISPS DC+ V+ Sbjct: 1 MSLKLACVVVL-CMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.525e-29 Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +KLAC VL+MCMV+ AP+A+ A++CG VTS L C+ CC G+K L +AA TTPDRQ+ CNCLK+AAGSI LN N A+ LP +CGV+IPY+IS S +C+ V+ Sbjct: 5 MKLACVVLVMCMVVIAPMAEGAISCGAVTSDLSPCLTYLTGGPGPSPQ--CCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.424e-29 Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +KLAC VL++CMV+ AP+A+ A++CG VTS L C+ CC G+K L +AA TTPDRQ+ CNCLK+AAGSI LN N A+ LP +CGVNIPY+IS + +C+ V+ Sbjct: 5 MKLACVVLVICMVVIAPMAEGAISCGAVTSDLSPCLTYLTGGPGPSPQ--CCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.978e-28 Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 +KLACAVLL C+V+ AP A+A +TCG V+S L C+ CC GIK+LN+AA TTPDR++ CNCLK+AA +I+ +N A+GLP CGV+IPY ISPS +C+ V Sbjct: 7 IKLACAVLL-CIVVAAPYAEAGITCGMVSSKLAPCIGYLKGGPLGGG---CCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.978e-28 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 77 CAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 C VL+MCMV+ AP+A+ A++CG VTS L C+ CC G+K L +AA TTPDRQ+ CNCLK+AAGSI LN N A+ LP +CGVNIPY+IS S +C+ V+ Sbjct: 1 CVVLVMCMVVIAPMAEGAISCGAVTSDLSPCLTYLTGGPGPSPQ--CCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.032e-27 Identity = 57/116 (49.14%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 62 ALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 ++K+ C L+MC+V+ AP+A++A+TCG+V ++L C+ CC G+++LNSAA TTPDRQ+ CNCLK+AAGSI LN N A+ LP +C VNIPY+IS S +C+ +R Sbjct: 3 SMKVVCVALIMCIVI-APMAESAITCGRVDTALAPCLGYLQGGPGPSAQ--CCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.032e-27 Identity = 58/116 (50.00%), Postives = 79/116 (68.10%), Query Frame = 2 Query: 62 ALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 ++KLAC VL+MCM++ AP+A+ A++CG VT L C+ CC G+K L +AA TTPDRQ+ CNC+K+AA SI LN N A+ LP +CGVNIPY+IS S +C+ V+ Sbjct: 4 SMKLACVVLVMCMIV-APMAEGAISCGAVTGDLSPCLTYLTGGPGPSPQ--CCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27 Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +A K+AC V+L CMV+ AP A+A +TCGQVTS+L C+ CC G+K+L ++A TT DRQ C CLK+AAG+I +NL A+GLP CGVNIPY+ISPS DCS+V+ Sbjct: 3 IAGKIACFVVL-CMVVAAPCAEA-ITCGQVTSNLAPCLAYLRNTGPLGR---CCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26 Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 2 Query: 62 ALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 ++ LAC L+MCMV+ AP+A+AAV+CG VT L C+ CC+G+K L +AA TT DRQ+ CNCLKTAAG+I NLN A+ LP +C VNIPY+IS + +C+ ++ Sbjct: 4 SMNLACVALVMCMVVIAPMAEAAVSCGTVTGDLAPCIPYLTGGAGPTDS--CCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117 The following BLAST results are available for this feature:
BLAST of CB290612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290612 ID=CB290612; Name=CB290612; organism=Citrus sinensis; type=EST; length=625bpback to top |