CB290665

Overview
NameCB290665
Unique NameCB290665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:952..1820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 400.593 bits (1028), Expect = 5.992e-111
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = -1
Query:  287 TASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 868
            TASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMK MRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  301 TASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.475e-82
Identity = 141/188 (75.00%), Postives = 164/188 (87.23%), Query Frame = -1
Query:  287 YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 850
            YGSHVMQYGD+GLSK+ LF YLGT+PAN+N TFVDENSL  +SKAVNQRDADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMK MRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  297 YGSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 1.102e-80
Identity = 134/189 (70.90%), Postives = 162/189 (85.71%), Query Frame = -1
Query:  287 SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 853
            SYGSHVMQYGD+G+SK+NL  Y+GTNPANDN+TF D NSL+P S+  NQRDADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+K MRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  306 SYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.920e-78
Identity = 138/192 (71.88%), Postives = 162/192 (84.38%), Query Frame = -1
Query:  287 YGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENS----LRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 850
            YGSHVM+YGDIGLSKN+L+ YLGTNPANDN +FVDE      LR  S AVNQRDADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMK MRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  302 YGSHVMEYGDIGLSKNDLYQYLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 3.106e-75
Identity = 132/192 (68.75%), Postives = 159/192 (82.81%), Query Frame = -1
Query:  287 SYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 862
            S  SYGSHVM++GDIGLSK  L  ++GTNPA++N+TFV+ENS+RP S+  NQRDADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+K MRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  288 SGKSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.029e-46
Identity = 91/196 (46.43%), Postives = 128/196 (65.31%), Query Frame = -1
Query:  287 TASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 868
            T++YN+Y  GSHVMQYG+  +  + L+ + G +PA+ N+   +   L    + VNQRDA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMK MR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  303 TSNYNTYAAGSHVMQYGNQSIKADKLYLFQGFDPASVNFP-PNNAHLNAPMEVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.964e-45
Identity = 89/196 (45.41%), Postives = 124/196 (63.27%), Query Frame = -1
Query:  287 TASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 868
            T+++N+Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L    + VNQRDA+L   W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMK MR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  301 TSNFNNYAMGSHVMQYGDTNITAEKLYLYQGFDPATVNFP-PQNGRLETKMEVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.838e-43
Identity = 87/196 (44.39%), Postives = 124/196 (63.27%), Query Frame = -1
Query:  287 TASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 868
            T+++ +Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L+   + VNQRDA+LL  W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMK MR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  299 TSNFEAYAMGSHVMQYGDANMTAEKLYLYHGFDPATVNFP-PHNGRLKSKMEVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.838e-43
Identity = 89/196 (45.41%), Postives = 123/196 (62.76%), Query Frame = -1
Query:  287 TASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 868
            T++ NSY  GSHVMQYGD  ++   L+ Y G +PA  N+   + N L    + VNQRDA+LL  W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMK MR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  281 TSNSNSYRFGSHVMQYGDTNITAEKLYLYHGFDPATVNFPPHNGN-LEAKMEVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CB290665 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 1.191e-42
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = -1
Query:  338 TASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKPMRSLANICNTGIGKEKMAEASAQAC 868
            T++YN+Y  GSHVM+YG+  +    L+ Y G +PA  N   ++E  ++     VNQRDADLL  W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMK MR+ AN+CN G+ KE M EAS  AC
Sbjct:  292 TSNYNTYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVNLP-LNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CB290665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI5.992e-11199.48Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU4.475e-8275.00Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH1.102e-8070.90Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA3.920e-7871.88Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH3.106e-7568.75Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO3.029e-4646.43Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN1.964e-4545.41Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.838e-4344.39Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN1.838e-4345.41Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH1.191e-4248.60Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01ch02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ch02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290665 ID=CB290665; Name=CB290665; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTTTTTTTTTTTGGGAACAAATATAGCTACATAAGCATCAAATAG
CATCGCATACATCCAAAATATATACTATCAAATTACAACTGCGGTCTGGC
AGGGAAGAGCTTTTAAATATAATAATTACAAGGAAGCAATCACCAGCCAA
ATGAAAATAGACATTGCCATAAATGGAAGCAATCATCAGCCAAATGAAAA
TAGATATTGCCATATTGGCGACTATAATGAAAACTAACATATTTCAAGAC
TGGCTTATGATATTCGCACAGTTCTCGGCTTCTTTATGCACTGAATCCTT
TGTCGAGAGAACTCCAAGGACCAGAAGGAATATTTTCACAGGCTTGTGCT
GATGCTTCAGCCATCTTCTCTTTCCCAATTCCTGTATTACAGATGTTTGC
AAGAGAACGCATGGGCTTCATTCCATATTGCGATAGAGCTCCACAGTGCG
ACTCAAAAGTCCTCACCAGTGATTTGAGGCAGCCCCAGTCATCAACAAGA
GGCTGACCAGCAGGTCGAACAGTGTTCAAGATCTCTGGACCTTTCTCAAT
TCCAAATAAGAGCTTTCCAATAAGTTTGATGCTGTGGTCTACATGCATTC
TATGAGACATTGCTTCAAAAAACTGCTTCTGAGCTTCAGCCTTCCTAGGA
GTGCCCTCAGGTGCCTTGCGGTACTTGTCCCAGAAATGCAAGAGATCGGC
ATCTCGCTGGTTAACAGCTTTAGATGCTGGCCTTAAGGAGTTCTCATCCA
CAAAAGTGTAGTTATCATTTGCAGGATTTGTACCCAAGTACGTGAAGAGA
TTGTTCTTGCTAAGACCGATATCACCATATTGCATGACATGAGAGCCATA
CGAATTGTAACTAGCAGT
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