CB290683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: CHIP_ARATH (E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.952e-68 Identity = 124/209 (59.33%), Postives = 156/209 (74.64%), Query Frame = 1 Query: 190 LAGVAK-QAEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKRSWELQSXXXXXXXXXXXXHVLDISIKEGFLDEASSTHLKQMEALRQVFRKAAKDDTPAEVPDYLCCKITL 813 + GVA AE+L+ DGN F K+R+GAAIDAYTEAI L PNVP YWTNRALCH+KR DWTKVE DCRKAIQL H+SVK HY+LGL LLQ+ E+ G+KEL++AL+LGR + P GY+VE+IW+EL++AKY+ WE S+ RSWEL S LD+S E DEA + H ++++AL +VF+KAA++D P EVPDYLCC ITL Sbjct: 2 VTGVASAMAERLKEDGNNCFKKERFGAAIDAYTEAIALSPNVPAYWTNRALCHMKRKDWTKVEEDCRKAIQLVHNSVKAHYMLGLALLQKKEFTNGVKELQRALDLGRCSNPTGYMVEEIWEELSKAKYMEWELVSAMRSWELNSLKETCEAALNQQRALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPTEVPDYLCCNITL 210
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: STUB1_HUMAN (STIP1 homology and U box-containing protein 1 OS=Homo sapiens GN=STUB1 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18 Identity = 66/213 (30.99%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 211 AEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLW---EQESSKRSWELQSXXXXXXXXXXXXHVLDISIK-EGFLDEA---------SSTHLKQMEALRQVFRKAAKDDTPAEVPDYLCCKIT 810 A++L+ GN F +Y A Y AIT P V +Y+TNRALC+LK + ADCR+A++LD SVK H+ LG L+ Y E I L++A +L + + + +DI L AK W E+ + EL S + + EG D++ + H K M + ++F + + ++PDYLC KI+ Sbjct: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK--EQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKIS 236
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: STUB1_MOUSE (STIP1 homology and U box-containing protein 1 OS=Mus musculus GN=Stub1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 66/213 (30.99%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 211 AEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLW---EQESSKRSWELQSXXXXXXXXXXXXHVLDISIK-EGFLDEA---------SSTHLKQMEALRQVFRKAAKDDTPAEVPDYLCCKIT 810 A++L+ GN F +Y A Y AIT P V +Y+TNRALC+LK + ADCR+A++LD SVK H+ LG L+ Y E I L++A +L + + + +DI L AK W E+ + EL S + + EG D+ + H K M + ++F + + ++PDYLC KI+ Sbjct: 27 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK--EQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKIS 237
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: STUB1_CHICK (STIP1 homology and U box-containing protein 1 OS=Gallus gallus GN=STUB1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 65/214 (30.37%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 211 AEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKR---SWELQSXXXXXXXXXXXXHVLDI--SIKEGFLDEA---------SSTHLKQMEALRQVFRKAAKDDTPAEVPDYLCCKIT 810 A++ + GN F +Y A AY AI P V +Y+TNRALC+LK K ADC++A++LD SVK H+ LG ++ Y E I L++A NL + + + +DI L AK W KR EL S + + + +E +DE+ + H K + + ++F + + ++PDYLC KI+ Sbjct: 36 AQEHKEQGNRLFGGRKYPEAAAAYGRAINRNPLVAVYYTNRALCYLKMQQHDKALADCKRALELDGQSVKAHFFLGQCQMEMENYDEAIANLQRAYNLAK--EQRLNFGDDIPSALRIAKKKRWNSIEEKRINQENELHSYLTRLIMAEKERELAECRKAQQEENVDESRGRVQLAGIEAKHDKYLADMDELFSQVDEKRKKRDIPDYLCGKIS 247
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: SGTB_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.616e-14 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 208 QAEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNL 504 +A+QL+ +GN + ++ Y AA+D YT+AI L PN +Y+ NRA K + +T DC KAI +D K + +GL L N++ E + +KAL+L Sbjct: 84 KADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDL 182
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: SGTB_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.616e-14 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 208 QAEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNL 504 +A+QL+ +GN + ++ Y AA+D YT+AI L PN +Y+ NRA K + +T DC KAI +D K + +GL L N++ E + +KAL+L Sbjct: 84 KADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDL 182
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 1 Query: 208 QAEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNL 504 +A+QL+ +GN + ++ Y AA+D YT+AI L PN +Y+ NRA K +T DC KAI +D K + +GL L N++ E + +KAL+L Sbjct: 84 KADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDL 182
BLAST of CB290683 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.742e-11 Identity = 33/99 (33.33%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 208 QAEQLRLDGNYYFSKDRYGAAIDAYTEAITLCPNVPIYWTNRALCHLKRNDWTKVEADCRKAIQLDHDSVKGHYLLGLTLLQRNEYAEGIKELEKALNL 504 +AE+ + N F +Y +AID YT+AI L N +YW NRA H K ++ D KAI++D KG+Y G L ++ + +K+ ++ L Sbjct: 12 RAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRL 110 The following BLAST results are available for this feature:
BLAST of CB290683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290683 ID=CB290683; Name=CB290683; organism=Citrus sinensis; type=EST; length=815bpback to top |