CB290721

Overview
NameCB290721
Unique NameCB290721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1062..1847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.573e-62
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = -3 
Query:  428 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 787
            KDPTKVDRSGA IVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMM+INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 392
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.389e-62
Identity = 114/121 (94.21%), Postives = 119/121 (98.35%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA +VRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  274 KDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 394
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.389e-62
Identity = 114/121 (94.21%), Postives = 119/121 (98.35%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVP+PLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNDRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKPQS 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.778e-62
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 392
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.277e-61
Identity = 114/121 (94.21%), Postives = 119/121 (98.35%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK QA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKTQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.668e-61
Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTG+IPDKEIL IVKE+FDFRPGM+TINLDLKRGGNGRFLKTA YGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPDFTWEIVKPLKWEKPQS 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.178e-61
Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.178e-61
Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.178e-61
Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -3 
Query:  425 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 787
            KDPTKVDRSGA IVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CB290721 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.845e-61
Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = -3 
Query:  434 KDPTKVDRSGASIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 787
            KDPTKVDRSGA IVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  273 KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390
The following BLAST results are available for this feature:
BLAST of CB290721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_SOLTU2.573e-6295.83S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK_MEDTR4.389e-6294.21S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK2_ELAUM4.389e-6294.21S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK1_POPTR9.778e-6296.69S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK2_VITVI1.277e-6194.21S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK1_ELAUM1.668e-6192.56S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK_BRARP2.178e-6193.39S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU2.178e-6193.39S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU2.178e-6193.39S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK5_VITVI2.845e-6196.61S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01db09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01db09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290721 ID=CB290721; Name=CB290721; organism=Citrus sinensis; type=EST; length=789bp
TTTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGACGTTATATTAA
TAAGCAAAACAACTATTGGGCTTTAGCCAAAGCTACAAATTAATACAACT
CGCGTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAA
GAATTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATC
ACTACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAG
TGGGGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTC
TGAACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATT
CAAATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAG
TTTTCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGG
GCTTCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCA
TAGGCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAA
ATTGATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTT
TGAGGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAA
ACAGACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCA
CCTGCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAA
TGGATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTC
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