CB290750

Overview
NameCB290750
Unique NameCB290750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:987..1894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 1.177e-104
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  313 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.919e-79
Identity = 136/182 (74.73%), Postives = 159/182 (87.36%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            QYGD+GLSK+ LF YLGT+PAN+N TFVDENSL  +SKAVNQRDADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  303 QYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 2.092e-77
Identity = 128/182 (70.33%), Postives = 156/182 (85.71%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            QYGD+G+SK+NL  Y+GTNPANDN+TF D NSL+P S+  NQRDADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  313 QYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.557e-75
Identity = 133/186 (71.51%), Postives = 157/186 (84.41%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENS----LRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            +YGDIGLSKN+L+ YLGTNPANDN +FVDE      LR  S AVNQRDADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  308 EYGDIGLSKNDLYQYLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 7.699e-72
Identity = 125/182 (68.68%), Postives = 152/182 (83.52%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            ++GDIGLSK  L  ++GTNPA++N+TFV+ENS+RP S+  NQRDADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  298 EFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.673e-42
Identity = 83/182 (45.60%), Postives = 117/182 (64.29%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            QYG+  +  + L+ + G +PA+ N+   +   L    + VNQRDA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  317 QYGNQSIKADKLYLFQGFDPASVNFP-PNNAHLNAPMEVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.727e-42
Identity = 82/182 (45.05%), Postives = 113/182 (62.09%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            QYGD  ++   L+ Y G +PA  N+       L    + VNQRDA+L   W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  315 QYGDTNITAEKLYLYQGFDPATVNFP-PQNGRLETKMEVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.028e-41
Identity = 81/182 (44.51%), Postives = 114/182 (62.64%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            QYGD  ++   L+ Y G +PA  N+       L+   + VNQRDA+LL  W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  313 QYGDANMTAEKLYLYHGFDPATVNFP-PHNGRLKSKMEVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.045e-40
Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = -2
Query:  361 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 906
            QYGD  ++   L+ Y G +PA  N+   + N L    + VNQRDA+LL  W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  295 QYGDTNITAEKLYLYHGFDPATVNFPPHNGN-LEAKMEVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CB290750 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 6.578e-39
Identity = 79/165 (47.88%), Postives = 105/165 (63.64%), Query Frame = -2
Query:  412 QYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 906
            +YG+  +    L+ Y G +PA  N   ++E  ++     VNQRDADLL  W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  306 EYGNNSIKSEKLYLYQGFDPATVNLP-LNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CB290750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.177e-104100.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU2.919e-7974.73Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH2.092e-7770.33Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA2.557e-7571.51Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH7.699e-7268.68Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.673e-4245.60Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN3.727e-4245.05Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU7.028e-4144.51Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN2.045e-4044.51Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH6.578e-3947.88Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290750 ID=CB290750; Name=CB290750; organism=Citrus sinensis; type=EST; length=907bp
TTTTTTTTTTTTTTTTAATCCAAATTAGAGCTTTTATTTCAATATTTAGA
GCAACACCACGAAGAGGGTTGAGTTGCACGGTCTACAAATCAGGAACAAA
TATAGCTACATAAGCATAAAATAGCATCGCATACATCCAAAATATATACT
ATCAAATTACAACTGCGGTCTGGCAGGGAAGAGCTTTTAAATATAATAAT
TACAAGGAAGCAATCACCAGCCAAATGAAAATAGACATTGCCATAAATGG
AAGCAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGCGACTATA
ATGAAAACTAACATATTTCAAGACTGGCTTATGATATTCGCACAGTTCTC
GGCTTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCAGAA
GGAATATTTTCACAGGCTTGTGCTGATGCTTCAGCCATCTTCTCTTTCCC
AATTCCTGTATTACAGATGTTTGCAAGAGAACGCATGTGCTTCATTCCAT
ATTGCGATAGAGCTCCACAGTGCGACTCAAAAGTCCTCACCAGTGATTTG
AGGCAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGTGTT
CAAGATCTCTGGACCTTTCTCAATTCCAAATAAGAGCTTTCCAATAAGTT
TGATGCTGTGGTCTACATGCATTCTATGAGACATTGCTTCAAAAAACTGC
TTCTGAGCTTCAGCCTTCCTAGGAGTGCCCTCAGGTGCCTTGCGGTACTT
GTCCCAGAAATGCAAGAGATCGGCATCTCGCTGGTTAACAGCTTTAGATG
CTGGCCTTAAGGAGTTCTCATCCACAAAAGTGTAGTTATCATTTGCAGGA
TTTGTACCCAAGTACGTGAAAAGATTGTTCTTGCTAAGACCGATATCACC
ATATTGC
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