CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ARATH (3-isopropylmalate dehydratase OS=Arabidopsis thaliana GN=IIL1 PE=2 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 2.495e-104 Identity = 175/206 (84.95%), Postives = 194/206 (94.17%), Query Frame = -2 Query: 264 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 881 +P D TT Y+E++TS+P+EPVYSD ASF+++YRFD+SKLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDF+AAAK+F A+G+KVKVPTFLVPATQKVWMDVY LPVPG+GGKTC+QIFEEAGCDTPASPSCGACLGGP DTYAR+NEP VCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTG V DPREFL+ Sbjct: 304 IPPDATTLNYVENRTSVPFEPVYSDGNASFVADYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDVYALPVPGAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEPQVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGRVADPREFLQ 509
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_METMA (3-isopropylmalate dehydratase large subunit 1 OS=Methanosarcina mazei GN=leuC1 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.810e-39 Identity = 97/203 (47.78%), Postives = 123/203 (60.59%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 VP D TF +L+++ PYEPVYSD AS+L E+ +D +EP VA PH DN E + +D+V+IG+CT G+ ED AA V GKKV V T ++PA++ TL G +I +AG T A+P CG CLG + + E VCVST NRNF GRMG K+G IYLASP TAAASALTG +TDPR+ Sbjct: 203 VPPDEKTFDFLKNRAVAPYEPVYSDPDASYLKEFVYDAGDIEPQVACPHQVDNVKPVGEVEGTHVDQVFIGTCTNGRLEDLEVAASVL--KGKKVTVRTIIIPASRS------TLLAAIKNG--TMEILLKAGV-TLATPGCGPCLGAHQGV---LGEGEVCVSTANRNFKGRMG-KDGFIYLASPATAAASALTGEITDPRK 390
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_METAC (3-isopropylmalate dehydratase large subunit 1 OS=Methanosarcina acetivorans GN=leuC1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.798e-36 Identity = 92/202 (45.54%), Postives = 120/202 (59.41%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 VP D TF++L+++ + YEPVY+D A +L E+ +D +EP VA PH DN E + +D+V+IG+CT G+ ED AA V GK+V V T ++PA++ TL G + +AG T A+P CG CLG + + E VCVST NRNF GRMG K G IYLASP TAAASALTG +TDPR Sbjct: 236 VPPDEKTFEFLKNRAAATYEPVYADPDAVYLEEFTYDADDIEPQVACPHQVDNVKPVGEVEGTHVDQVFIGTCTNGRLEDLEVAAAVL--KGKQVAVRTIVIPASRT------TLLAAIENG--TMETLLKAGV-TLATPGCGPCLGAHQGV---LGEGEVCVSTANRNFKGRMG-KGGFIYLASPATAAASALTGEITDPR 422
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC1_METKA (3-isopropylmalate dehydratase large subunit 1 OS=Methanopyrus kandleri GN=leuC1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.443e-35 Identity = 86/205 (41.95%), Postives = 116/205 (56.59%), Query Frame = -2 Query: 267 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 881 VP D T +Y++ + PV D A + +E D+S LEP VAKP SPDN E + + ID+V+IGSCT G+ ED AA+V V ++PA+++V+ V ++ EAG P+CG CLGG A E CV+T+NRNFPGRMGH+E ++YLASP TAAASA+ G +TDPR +L Sbjct: 226 VPPDEKTLEYVKKRAGTEGRPVEPDPDARYEAELTLDVSDLEPQVAKPFSPDNVVPVGEVEGIAIDQVFIGSCTNGRYEDLKVAAEVLEGEEVHDDVRLIVIPASREVYHRTLKDGV--------LEVLHEAGA-LICPPNCGPCLGGHMGVLA---EGERCVATSNRNFPGRMGHRESEVYLASPATAAASAIEGEITDPRPYL 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_HALOH (3-isopropylmalate dehydratase large subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=leuC PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.215e-35 Identity = 82/205 (40.00%), Postives = 112/205 (54.63%), Query Frame = -2 Query: 267 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 881 + D TFKYLE++ Y P YSD+ A + +D+S +EP VA PH P+N E D+KID+ IGSCT G+ ED AA + V ++P TQ ++ + +IF EAG ++P+CG CLGG AR + ++TTNRNF GRMGH E ++YLA+P AAASA+ GY+ P E L Sbjct: 228 IAPDEKTFKYLENRAQRDYTPCYSDDDAEYEKVIEYDVSDIEPQVAFPHLPENTRPISEEGDIKIDQAVIGSCTNGRMEDLRIAAGILKEKQVHHDVRCIVIPGTQDIYKQALK--------EGLIEIFIEAGA-AVSTPTCGPCLGGHMGILARGEK---AIATTNRNFVGRMGHPESEVYLANPAVAAASAIKGYIAHPEEVL 420
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CLOK5 (3-isopropylmalate dehydratase large subunit OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=leuC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.764e-33 Identity = 79/202 (39.11%), Postives = 112/202 (55.45%), Query Frame = -2 Query: 273 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 878 P D T +Y+++ ++ Y +DE A ++ D+SK+ P VA PH P+N E ++KID+V IGSCT G+ D AAKV V T + PATQ +++ + +IF E+G ++P+CG CLGG A+ V+TTNRNF GRMGH E ++YLASP AAASA+TG ++ P E Sbjct: 229 PVDEKTIEYVKEHSNRSYTVYEADEDAEYVKTIEIDLSKIPPTVAFPHIPENTRTIDEVGEIKIDQVVIGSCTNGRIGDLRVAAKVLKGRKVNSNVRTIIFPATQSIYLQAMK--------EGLLEIFIESGA-VVSTPTCGPCLGGHMGILAKGER---AVATTNRNFTGRMGHVESEVYLASPAVAAASAVTGKISSPEE 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CLOB8 (3-isopropylmalate dehydratase large subunit OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=leuC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.930e-33 Identity = 84/202 (41.58%), Postives = 111/202 (54.95%), Query Frame = -2 Query: 279 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDP 878 P D T +YL+D S ++ +DE A + + D+S+L P V+ PH PDN DV ID+V IGSCT G+ D A + GKKVK + ++P TQK+++ + EAG ++P+CG CLGG A+ CVSTTNRNF GRMGH E ++YLASP AAASALTG +TDP Sbjct: 229 PVDDKTEEYLKDHASREWKVYEADEDAEYDKVFEIDLSELRPTVSFPHLPDNTRTIDNTGDVAIDQVVIGSCTNGRISDLRMARDIL--KGKKVKKGIRCIVIPGTQKIYLQAIKEGIVTD--------LVEAGA-AFSTPTCGPCLGGHMGILAKGER---CVSTTNRNFVGRMGHVESEVYLASPAVAAASALTGKITDP 416
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CLOTH (3-isopropylmalate dehydratase large subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=leuC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.143e-32 Identity = 81/202 (40.10%), Postives = 115/202 (56.93%), Query Frame = -2 Query: 273 DGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 872 D T +Y+++ ++ Y+ +DE A +++ Y D+S+++P VA PH P N ++KID+V IGSCT G+ ED AA+V G+KV V ++PATQK+W + IF +AG ++P+CG CLGG A+ V+TTNRNF GRMGH E +IYLASP AAASA+ G + P E Sbjct: 231 DEKTIEYVKEHSTRQYKVYKADEDAEYVATYEIDLSQVKPTVAFPHLPSNTRTIDNVGNIKIDQVVIGSCTNGRIEDLRVAAEVL--KGRKVHKDVRCIIIPATQKIWKQAM--------NEGLFDIFIDAGA-AVSTPTCGPCLGGHMGILAKGER---AVATTNRNFVGRMGHPESEIYLASPAVAAASAVLGRIGSPDE 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_HELMI (3-isopropylmalate dehydratase large subunit OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=leuC PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.345e-32 Identity = 80/205 (39.02%), Postives = 111/205 (54.15%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D T Y+E++ + PY+ SD A + ++D+ KLEP+VA PH P+N E V+ID+V IGSCT G+ ED AAK+ GKKV V + P TQ ++ + IF +AG ++P+CG CLGG A+ ++TTNRNF GRMGH E ++YL P AAASA+ G + PRE Sbjct: 228 IAPDKKTIAYVEERATRPYKVYTSDPDAKYARVIKYDVEKLEPVVAFPHLPENTRPVSEAGHVEIDQVVIGSCTNGRIEDLRMAAKIL--QGKKVHKNVRCIIFPGTQAIYKQAIK--------EGLIDIFIDAGA-AVSTPTCGPCLGGHMGILAKGER---ALATTNRNFVGRMGHPESEVYLCGPNVAAASAIAGRIVHPRE 418
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CLOPH (3-isopropylmalate dehydratase large subunit OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=leuC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.675e-32 Identity = 81/204 (39.71%), Postives = 113/204 (55.39%), Query Frame = -2 Query: 273 PADGTTFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 878 P D T Y+++ + PY +DE A + ++S+LEP VA PH P+N +E +V+ID+V IGSCT G+ D AAKV G+KV + + PATQ +++ + Q F +AGC ++P+CG CLGG A STTNRNF GRMGH E ++YL SP AAASA+TG +++P E Sbjct: 229 PVDDLTISYMKEHGAKPYTIYEADEDAEYEQIITINLSELEPTVAFPHLPENTKTVKEAGEVRIDQVVIGSCTNGRIGDLRIAAKVL--EGRKVAKGMRAIVFPATQAIYLQAIE--------EGLIQTFIKAGC-VVSTPTCGPCLGGHMGILAAGER---AASTTNRNFVGRMGHVESEVYLCSPAVAAASAVTGKISEPSE 418 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |