CB290758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_ARATH (3-isopropylmalate dehydratase OS=Arabidopsis thaliana GN=IIL1 PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 3.451e-96 Identity = 165/219 (75.34%), Postives = 191/219 (87.21%), Query Frame = 1 Query: 112 SSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 +SVIS +P ++K DLG F +SQ S+++C+K ++S+KIVSVMAPQ+ +R P TTGSVK MT+TEKI ARASEK + PGDN+WVNVD+LMTHDVCGPG+FGIFK+EFGE AKVWD EKIV+IPDHYIFT+D+RANRNVDI+R+ C EQNIKYFYDI DLGNFKANPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD Sbjct: 2 ASVISSSPFLCKSSSKSDLGISSFPKSSQISIHRCQKKSISRKIVSVMAPQK-DRSPGTTGSVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFGEKAKVWDPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 219
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_METJA (Isopropylmalate/citramalate isomerase large subunit OS=Methanocaldococcus jannaschii GN=leuC PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35 Identity = 77/153 (50.33%), Postives = 99/153 (64.71%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+ EKI A+AS K ++SPGD V N+D+ M HD+ GP + K E+G KVW+ EKIVI+ DH + +A N ++R F EQ IKYFYDI++ GVCH L ++GH PGEV++G DSHTCT GAFG FATGIG+TD Sbjct: 3 MTIVEKILAKASGKKEVSPGDIVMANIDVAMVHDITGPLTVNTLK-EYGIE-KVWNPEKIVILFDHQVPADSIKAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPEKGHVAPGEVVVGADSHTCTHGAFGAFATGIGSTD 142
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC1_METTH (3-isopropylmalate dehydratase large subunit 1 OS=Methanobacterium thermoautotrophicum GN=leuC1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.083e-33 Identity = 75/154 (48.70%), Postives = 101/154 (65.58%), Query Frame = 1 Query: 307 AMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 +MT++EKI ARAS K ++ G+ V ++D+ MTHD+ GP S F+ GE+ +VWD EKIV+I DH + A +N I+RDF EQ I+ FYD+++ GVCH L ++GH PGEV++GTDSHTCT GA G FATGIG+TD Sbjct: 2 SMTVSEKILARASGKDRVEAGEIVMADIDVAMTHDLTGPLSVESFRA-IGED-RVWDPEKIVVIFDHQVPADSIEAAQNHMIMRDFVEEQGIRNFYDVRE-----------GVCHQVLPEKGHVVPGEVVVGTDSHTCTHGALGAFATGIGSTD 142
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC1_METKA (3-isopropylmalate dehydratase large subunit 1 OS=Methanopyrus kandleri GN=leuC1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.080e-28 Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 1 Query: 313 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 T+ EKI +RAS + GD V N+D+ M HD+ GP + + E +VWD KIV++ DH + A N I+R+F EQ I++FYD+++ GVCH L ++GH RPG+V++G DSHTCT GA G FATGIG+TD Sbjct: 4 TMAEKILSRASGE-DAEAGDIVVANIDVAMVHDITGP--ITVQRLEEMGVERVWDPSKIVVLFDHQVPADSVEAAENHKIMREFVEEQGIEHFYDVRE-----------GVCHQVLPEKGHVRPGDVIVGADSHTCTHGALGAFATGIGSTD 141
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC2_METMA (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina mazei GN=leuC2 PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.022e-28 Identity = 70/157 (44.59%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT++EKIF++AS P + GD V N+D+ MTHD+ GP G + I + E E+ KVWD KIVII DH + A +N +LR F EQ I YD+ Y+GVCH L ++GH +PG++++G+DSHTC G+ G F+TGIG+TD Sbjct: 1 MTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE--EDKKVWDPSKIVIIFDHQVPADSINAAQNHIMLRKFAKEQGILN-YDV-----------YEGVCHQVLPEKGHVKPGDLIVGSDSHTCAYGSLGAFSTGIGSTD 142
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC2_METAC (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina acetivorans GN=leuC2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.996e-27 Identity = 70/157 (44.59%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT++EKIF++AS P + GD V N+D+ MTHD+ GP G + I + E E KVWD KIVII DH + A N +LR F EQ I YD+ Y+GVCH L ++GH PG++++G+DSHTC G+ G F+TGIG+TD Sbjct: 1 MTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE--EEKKVWDPSKIVIIFDHQVPADSINAAENHIMLRKFAKEQGILN-YDV-----------YEGVCHQVLPEKGHVLPGDLIVGSDSHTCAYGSLGAFSTGIGSTD 142
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_SYNAS (3-isopropylmalate dehydratase large subunit OS=Syntrophus aciditrophicus (strain SB) GN=leuC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.422e-26 Identity = 61/153 (39.87%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+TEKI R ++ ++ PG + VDI + +DV P + F+K G+ KV+DR+K+V+IPDH+ D + I+RDF EQ I ++Y++ ++G V H L ++G PG++++G DSHTCT GA G FATG+G+TD Sbjct: 3 MTITEKILCRHTDLDEVRPGMLINAKVDIALGNDVTAPLAIDEFRKAGGK--KVFDRDKVVLIPDHFTPNKDINSAAQCKIMRDFAREQEITHYYEVGEVG----------VEHALLPEKGIVLPGDLVIGADSHTCTYGALGAFATGVGSTD 143
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_DESAA (3-isopropylmalate dehydratase large subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=leuC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.211e-24 Identity = 57/153 (37.25%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+ EKI A + + + SPGD + VDI + +D+ P + +F++ AKV+D++++V++PDH+ T D + V ++RDF EQ + ++Y+ D GV H L ++G PG++++G DSHTCT G G FATG+G+TD Sbjct: 3 MTIAEKILAAHAGQEEASPGDLINAKVDIALGNDITAPIAIKLFRQSGA--AKVFDKDRVVLVPDHFTPTKDINSAMQVKMVRDFAREQELSHWYEGGD----------SGVEHALLPEKGIVGPGDLVIGADSHTCTYGGLGAFATGVGSTD 143
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC1_ARCFU (3-isopropylmalate dehydratase large subunit 1 OS=Archaeoglobus fulgidus GN=leuC1 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.698e-24 Identity = 62/154 (40.26%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 307 AMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 A TL EKIF++AS K ++ G+ V N+D+ M HD+ P + F++ G +AKVWD+ K+++ DH + A N +LR F EQ I YD+K G+ H + E H PG +++G DSHTC GA G FATGIG+TD Sbjct: 2 AQTLVEKIFSKASGK-EVKAGEFVMANIDLAMIHDITAPLAIKAFREILGSDAKVWDKSKVIMAFDHQVPADSVHAAENHKMLRKFAEEQGI-LNYDVKG-----------GIAH-QIMVENHVEPGMLIVGADSHTCMYGALGAFATGIGSTD 141
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_THEYD (3-isopropylmalate dehydratase large subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.284e-23 Identity = 56/153 (36.60%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+ EKI A + K +++PG+ + VDI++ +D+ P + F+K ++ V+DRE+I ++PDH+ D +A +LR+F + IK++++I +G + H L +EG PG++++G DSHTCT GA G FATG+G+TD Sbjct: 3 MTIAEKILAAHAGKKEVTPGEIINAKVDIVLANDITAPIAIKEFEKLGVKD--VFDRERIALVPDHFTPQKDIKAAEQCKMLREFAQKYKIKHYFEIGRVG----------IEHALLPEEGIVLPGDLVIGADSHTCTYGALGAFATGVGSTD 143 The following BLAST results are available for this feature:
BLAST of CB290758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290758 ID=CB290758; Name=CB290758; organism=Citrus sinensis; type=EST; length=769bpback to top |