CB290827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.865e-28 Identity = 82/233 (35.19%), Postives = 124/233 (53.22%), Query Frame = 1 Query: 130 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNG-DDCKNK---KKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGP 813 +FL VP +++ ++ V + DV I++++ L R+Y P + D +N + +P+I+ FHGG F S A+ +Y + +L A+ VSV RRAPE+R P A+DDG+ L W+ S ++WL D + R+FL GDSSGGN+VH VA RA + S + V G I ++P F ER++SE +T+ D + LP D+ HP P GP Sbjct: 47 EFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS----------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGP 266
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.206e-25 Identity = 83/249 (33.33%), Postives = 119/249 (47.79%), Query Frame = 1 Query: 88 DGSVDRTWTGPPEVKFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK-------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGP 813 DGS +R +FL VP +S +D V + D ++ + L RIY P + K +P+++ FHGG F S A+ +Y +L + VSV RR+PEHR P A+DDG+ AL W++S Q+ N + V+L GDSSGGN+ H VA RA + ++V G I +HP F QER++SE +T+ D + LP D+ HP P GP Sbjct: 38 DGSFNRDLA-----EFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVY---------VYLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGP 268
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.575e-25 Identity = 81/245 (33.06%), Postives = 115/245 (46.94%), Query Frame = 1 Query: 130 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGD-----------------DCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGP 813 ++L VP ++ ++ V++ D I++ GL VRIY GD D + P+I+ FHGG F S A +Y + + K + VSV RRAPEHR P A+DDG+ AL W+ S ++ RVFL GDSSGGN+ H VA RA D ++V G I ++ F ER++SE +TL D + LP ++D+ HP P GP Sbjct: 47 EYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAA----EGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQ---------ARVFLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGP 275
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.985e-25 Identity = 79/235 (33.62%), Postives = 116/235 (49.36%), Query Frame = 1 Query: 130 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGP 813 ++L V +++ +D V + DV I++ L R+Y P + + +K +P+IL FHGG F S A+ +Y + +L + VSV RRAPE+ P A+DDG+ AL W+ S S WL D + +FL GDSSGGN+ H VA RAG+ S + V G I ++P F ER++SE +T+ D + LP D+ HP P P Sbjct: 47 EYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS----------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSP 268
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11 Identity = 61/205 (29.76%), Postives = 96/205 (46.83%), Query Frame = 1 Query: 127 VKFLS--EPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR-AGDADLSPLRVAGAIPIHPGFLRQERS-KSELENPQSPLLT 729 VKFL+ + VPP SD ++V + T N + VR+Y P+ K+K + + HGGG+CV A Y + + A + + VS R APE+ P F+D ++AL W + + VD +RV + GDS+GGN+ VA + D D+ +++ I+P + S EN Q P+L+ Sbjct: 61 VKFLTSFQEVPPTSD--ENVTVTETTFNN---VPVRVYVPKR---------KSKTLRRGLFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLRQDVLEKYG---------VDPERVGVSGDSAGGNLAAAVAQQLIKDPDVK-IKLKTQSLIYPALQTLDMDLPSYRENAQFPILS 241
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11 Identity = 56/216 (25.93%), Postives = 101/216 (46.76%), Query Frame = 1 Query: 163 DFIDSVATHDVTINKES--GLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEH-VDFQRVFLIGDSSGGNVVHEVAARA-GDADLSPLRVAGAIPIHPGF-LRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPY 795 D+ ++ +T+ + + VR+Y P+ K++ + +++FHGGGFC + + + A ++ A+ V V R AP+H PA F+DG A+ + + LT++ VD R+ + GDSSGGN+ V + DA++ ++ + ++PG + S EN +LT D+ K +S L D+ P+ Sbjct: 69 DYTQPLSDEYITVTDTTFVDIPVRLYLPKR---------KSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFFLLEKI----------LTKYGVDPTRICIAGDSSGGNLATAVTQQVQNDAEIKH-KIKMQVLLYPGLQITDSYLPSHRENEHGIVLTRDVAIKLVS--LYFTKDEALPW 262
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: AAAD_BOVIN (Arylacetamide deacetylase OS=Bos taurus GN=AADAC PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11 Identity = 55/203 (27.09%), Postives = 91/203 (44.83%), Query Frame = 1 Query: 151 PPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERS-KSELENPQSPLLTLDMVDKFLS 756 PP SD +++ D T N + VRIY P++ K K + + HGGG+C D+Y Y + A+ + A+ +S R AP++ P F+D + AL W N + VD R+ + GDS+GGN+ VA + + +++ I+P + S EN P+L+ ++ +F S Sbjct: 72 PPTSD--ENIIVKDTTFND---IPVRIYVPQQ---------KTKSLRRGLFYIHGGGWCFGSNDYYSYDLLSRWTAERLDAVVISTNYRLAPKYHFPVQFEDVYTALKWFLD---------PQNLESYGVDPGRIGISGDSAGGNLAAAVAQQLLEDPDVKIKLKVQTLIYPALQNFDFDLPSYRENAHYPVLSKSLMVRFWS 251
BLAST of CB290827 vs. ExPASy Swiss-Prot
Match: AAAD_RAT (Arylacetamide deacetylase OS=Rattus norvegicus GN=Aadac PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 55/204 (26.96%), Postives = 92/204 (45.10%), Query Frame = 1 Query: 148 VPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERS-KSELENPQSPLLTLDMVDKFLS 756 VPP SD ++V + N + VRIY P+ K+ + HGGG+C+ A ++MY + + A + A+ VS AP++ P F+D + +L W + + VD +RV + GDS+GGN+ V + +++ I+P + + S+ EN Q PLLT ++ +F S Sbjct: 70 VPPTSD--ENVTVMETDFNS---VPVRIYIPKR---------KSTTLRRGLFFIHGGGWCLGSAAYFMYDTLSRRTAHRLDAVVVSTDYGLAPKYHFPKQFEDVYHSLRWFLQEDILEKYG---------VDPRRVGVSGDSAGGNLTAAVTQQILQDPDVKIKLKVQALIYPALQALDMNVPSQQENSQYPLLTRSLLIRFWS 250 The following BLAST results are available for this feature:
BLAST of CB290827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290827 ID=CB290827; Name=CB290827; organism=Citrus sinensis; type=EST; length=816bpback to top |