CB290828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290828 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.129e-21 Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = -2 Query: 292 LAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 771 L ++WL D + R+FL GDSSGGN+VH VA RA ++ + V G I ++P F ER++SE +T+ D + LP D+ HP P GP ++GL P L+ VAG DLI+D +++Y E +KKAG++V+LL FYL Sbjct: 164 LKWVNSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRID---VLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYL 321
BLAST of CB290828 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20 Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = -2 Query: 292 NWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 750 +WL D + +FL GDSSGGN+ H VA RAG++ + V G I ++P F ER++SE +T+ D + LP D+ HP P P G ++G+ P L+ VAG DLI+D ++ Y E +KKAG++V+L+ FYL Sbjct: 173 SWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID---VLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYL 323
BLAST of CB290828 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19 Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = -2 Query: 295 NWLTEHVDFQR-------VFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFY 750 NW+ V Q V+L GDSSGGN+ H VA RA V +V G I +HP F QER++SE +T+ D + LP D+ HP P GP G + G+ P L+ VAG DL++D ++ Y + +KK G +V LL FY Sbjct: 167 NWVKSRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGV---KVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFY 322
BLAST of CB290828 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15 Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = -2 Query: 292 RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 720 RVFL GDSSGGN+ H VA RA V +V G I ++ F ER++SE +TL D + LP ++D+ HP P GP G + GL L+ V+G DL D ++ Y +A+++ G V+++ FYL Sbjct: 191 RVFLSGDSSGGNIAHHVAVRAADEGV---KVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYL 330 The following BLAST results are available for this feature:
BLAST of CB290828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290828 ID=CB290828; Name=CB290828; organism=Citrus sinensis; type=EST; length=772bpback to top |