CB290829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290829 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.807e-36 Identity = 91/229 (39.74%), Postives = 128/229 (55.90%), Query Frame = 2 Query: 17 LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 700 +P+I+ FHGG F S A+ +Y + +L A+ VSV RRAPE+R P A+DDG+ L W+ S S WL D + R+FL GDSSGGN+VH VA RA ++ + V G I ++P F ER++SE +T+ D + LP D+ HP P GP ++GL P L+ VAG DLI+D +++Y E +KKAG++V+LL FYL Sbjct: 104 VPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS--------WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRID---VLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYL 321
BLAST of CB290829 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.280e-34 Identity = 88/229 (38.43%), Postives = 125/229 (54.59%), Query Frame = 2 Query: 17 LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 700 +P+IL FHGG F S A+ +Y + +L + VSV RRAPE+ P A+DDG+ AL W+ S S WL D + +FL GDSSGGN+ H VA RAG++ + V G I ++P F ER++SE +T+ D + LP D+ HP P P G ++G+ P L+ VAG DLI+D ++ Y E +KKAG++V+L+ FYL Sbjct: 106 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS--------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID---VLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYL 323
BLAST of CB290829 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 86/228 (37.72%), Postives = 119/228 (52.19%), Query Frame = 2 Query: 17 LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFY 697 +P+++ FHGG F S A+ +Y +L + VSV RR+PEHR P A+DDG+ AL W++S WL D V+L GDSSGGN+ H VA RA V +V G I +HP F QER++SE +T+ D + LP D+ HP P GP G + G+ P L+ VAG DL++D ++ Y + +KK G +V LL FY Sbjct: 106 VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS--------RVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGV---KVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFY 322
BLAST of CB290829 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30 Identity = 84/228 (36.84%), Postives = 118/228 (51.75%), Query Frame = 2 Query: 20 PIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 700 P+I+ FHGG F S A +Y + + K + VSV RRAPEHR P A+DDG+ AL W+ S ++ D Q RVFL GDSSGGN+ H VA RA V +V G I ++ F ER++SE +TL D + LP ++D+ HP P GP G + GL L+ V+G DL D ++ Y +A+++ G V+++ FYL Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS--------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGV---KVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYL 330
BLAST of CB290829 vs. ExPASy Swiss-Prot
Match: YKN2_SCHPO (AB hydrolase superfamily protein B1A11.02 OS=Schizosaccharomyces pombe GN=SPAPB1A11.02 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11 Identity = 63/237 (26.58%), Postives = 106/237 (44.73%), Query Frame = 2 Query: 23 IILHFHGGGFC---VSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAG---AIP--IHPGFLRQE---RSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 700 +++ +H G+C V D ++ L +CVSV R APE + P A +D ++ W+ S ++ + N + FL G S+GGN V ++ A + P + G +P IHP L +E + +S E +P++T ++D F P P + + P P LPP G D ++D + Y +A+K AG + L+V G+ H F++ Sbjct: 92 LMVFYHSSGWCMRGVRDDD-----SLFKILTPKFGCVCVSVDYRLAPESKFPVAHNDAIDSFKWVAS-NIEKLGAN-------PKRGFFLGGASAGGNFVSVLSHIARDEKIKP-ELTGLWHMVPTLIHPADLDEETMAQFRSYKETIHAPVITPKIMDIFFENYQPT------PKSPLVNPLYYPTGHKDLPPSFFQCCGWDPLRDEGIAYEKALKAAGNETRLIVYEGVPHCFWV 308
BLAST of CB290829 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 48/174 (27.59%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 2 KNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQARENNWLTEH-VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF-LRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPY 517 K++ + +++FHGGGFC + + + A ++ A+ V V R AP+H PA F+DG A+ + + LT++ VD R+ + GDSSGGN+ V + ++ + ++PG + S EN +LT D+ K +S L D+ P+ Sbjct: 99 KSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFFLLEKI--------LTKYGVDPTRICIAGDSSGGNLATAVTQQVQNDAEIKHKIKMQVLLYPGLQITDSYLPSHRENEHGIVLTRDVAIKLVS--LYFTKDEALPW 262 The following BLAST results are available for this feature:
BLAST of CB290829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290829 ID=CB290829; Name=CB290829; organism=Citrus sinensis; type=EST; length=715bpback to top |