CB290836

Overview
NameCB290836
Unique NameCB290836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8646 contig Csv1_Contig8646:220..1074. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRC_PEA (Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.919e-84
Identity = 153/189 (80.95%), Postives = 169/189 (89.42%), Query Frame = -3
Query:  287 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSNPKTNL 853
            VE D+ GA+ VDE SR N+PSIWAVGDVTNR+NLTPVALME   FAKTVFGGQ  KPDY D+P AVFCIPPLSVVGLSEEQA+EQ KGD+L+FTS+FNPM+NTISGRQEKTVMKLVVDA+T+KVLGASMCGP+APEI+QGIA+A+KCGATKAQFDSTVGIHPSSAEEFVTMRS TRRV      PKTNL
Sbjct:  311 VEFDKAGAIVVDEYSRTNIPSIWAVGDVTNRLNLTPVALMEASLFAKTVFGGQASKPDYNDIPYAVFCIPPLSVVGLSEEQAVEQTKGDVLIFTSTFNPMKNTISGRQEKTVMKLVVDAQTDKVLGASMCGPDAPEIVQGIAIAIKCGATKAQFDSTVGIHPSSAEEFVTMRSETRRV-TGGVKPKTNL 498          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRC_ORYSJ (Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica GN=GRC2 PE=2 SV=2)

HSP 1 Score: 310.457 bits (794), Expect = 7.919e-84
Identity = 152/189 (80.42%), Postives = 174/189 (92.06%), Query Frame = -3
Query:  287 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSNPKTNL 853
            VEVD  GA+KVD+ SR +VP+IWAVGDVTNR+NLTPVALME  CF+KTVFGGQP KPDYRDVPCAVF IPPLSVVGLSE+QA+E+ K D+LV+TSSFNPM+N+IS RQEKTVMKLVVD+ET+KVLGASMCGP+APEI+QG+AVALKCGATKA FDSTVGIHPS+AEEFVTMR++TRRV + SS PKTNL
Sbjct:  309 VEVDNIGAIKVDDYSRTSVPNIWAVGDVTNRINLTPVALMEATCFSKTVFGGQPTKPDYRDVPCAVFSIPPLSVVGLSEQQALEEAKSDVLVYTSSFNPMKNSISKRQEKTVMKLVVDSETDKVLGASMCGPDAPEIIQGMAVALKCGATKATFDSTVGIHPSAAEEFVTMRTLTRRV-SPSSKPKTNL 496          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRP_SPIOL (Glutathione reductase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.351e-83
Identity = 156/189 (82.54%), Postives = 170/189 (89.95%), Query Frame = -3
Query:  287 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSNPKTNL 853
            VE+D+TGAVKVDE SR +VPSIWA+GDVTNRMNLTPVALMEG CFAKTVFGGQ  KPDY ++ CAVF IPPL+VVGLSEEQAIEQ  GDILVFTSSFNPM+NTISGRQEKT+MKLVVDAET+KVLGASMCGP+A EIMQGIA+ALK GATKAQFDSTVGIHPS+AEEFVTMR  +RRV  A   PKTNL
Sbjct:  302 VELDRTGAVKVDEYSRTSVPSIWAIGDVTNRMNLTPVALMEGTCFAKTVFGGQNSKPDYSNIACAVFSIPPLAVVGLSEEQAIEQASGDILVFTSSFNPMKNTISGRQEKTIMKLVVDAETDKVLGASMCGPDAAEIMQGIAIALKFGATKAQFDSTVGIHPSAAEEFVTMREPSRRVPGA-GKPKTNL 489          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRC_ARATH (Glutathione reductase, cytosolic OS=Arabidopsis thaliana GN=At3g24170 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.264e-81
Identity = 148/189 (78.31%), Postives = 167/189 (88.36%), Query Frame = -3
Query:  287 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSNPKTNL 853
            VE+DQ GAVKVDE SR N+PSIWAVGD TNR+NLTPVALME  CFA T FGG+P K +Y +V CAVFCIPPL+VVGLSEE+A+EQ  GDILVFTS FNPM+NTISGRQEKT+MKL+VD +++KV+GASMCGP+A EIMQGIA+ALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR+ A    PKTNL
Sbjct:  312 VELDQAGAVKVDEYSRTNIPSIWAVGDATNRINLTPVALMEATCFANTAFGGKPTKAEYSNVACAVFCIPPLAVVGLSEEEAVEQATGDILVFTSGFNPMKNTISGRQEKTLMKLIVDEKSDKVIGASMCGPDAAEIMQGIAIALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRI-AHKPKPKTNL 499          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRC_BRARP (Glutathione reductase, cytosolic OS=Brassica rapa subsp. pekinensis GN=GR1 PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 4.804e-81
Identity = 146/189 (77.25%), Postives = 169/189 (89.42%), Query Frame = -3
Query:  287 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSNPKTNL 853
            VE+DQ GAVKVDE SR N+PSIWAVGD TNR+NLTPVALME  CFA TVFGG+P K DY +V CAVFCIPPL+VVGLSEE+A+E+  GDILVFTS FNPM+NTISGRQEK++MKL+VD +T+KV+GASMCGP+A EIMQGIA+ALKCGATKAQFDSTVGIHPSSAEEFVTMR+VTRR+ A  + P+T+L
Sbjct:  315 VELDQAGAVKVDEYSRTNIPSIWAVGDATNRINLTPVALMEATCFANTVFGGKPAKADYTNVACAVFCIPPLAVVGLSEEEAVEKATGDILVFTSGFNPMKNTISGRQEKSLMKLIVDEKTDKVIGASMCGPDAAEIMQGIAIALKCGATKAQFDSTVGIHPSSAEEFVTMRTVTRRI-AYKAKPQTSL 502          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRP_TOBAC (Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 5.169e-59
Identity = 113/186 (60.75%), Postives = 147/186 (79.03%), Query Frame = -3
Query:  296 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSNPK 853
            V++ + GA++VDE SR +VPSIWAVGDVT+R+NLTPVALMEG   AKT+F  +P KPDYR+VP AVF  PP+  VGL EEQAI++  GD+ V+T++F P++ TISG  ++  MKL+V A+T KVLG  MCG +APEI+QG A+A+K G TKA FD+TVGIHP+SAEEFVTMR+ TR+V ++ S  K
Sbjct:  362 VKMTKNGAIEVDEYSRTSVPSIWAVGDVTDRINLTPVALMEGGALAKTIFAHEPTKPDYRNVPAAVFSQPPIGQVGLMEEQAIKEF-GDVDVYTANFRPLKATISGLPDRVFMKLIVCAKTSKVLGLHMCGDDAPEIVQGFAIAVKAGLTKADFDATVGIHPTSAEEFVTMRTPTRKVRSSPSEGK 546          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRP_ARATH (Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.817e-59
Identity = 112/188 (59.57%), Postives = 145/188 (77.13%), Query Frame = -3
Query:  290 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSNPKTN 853
            V++ + GA++VDE S+ +VPSIWAVGDVT+R+NLTPVALMEG   AKT+F  +P KPDYR VPCAVF  PP+  VGL+EEQAIEQ  GD+ V+TS+F P++ T+SG  ++  MKL+V A T KVLG  MCG ++PEI+QG  VA+K G TKA FD+TVG+HP++AEEFVTMR+ TR+    SS  K +
Sbjct:  370 VKMAKNGAIEVDEYSQTSVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQNEPTKPDYRAVPCAVFSQPPIGTVGLTEEQAIEQ-YGDVDVYTSNFRPLKATLSGLPDRVFMKLIVCANTNKVLGVHMCGEDSPEIIQGFGVAVKAGLTKADFDATVGVHPTAAEEFVTMRAPTRKFRKDSSEGKAS 556          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRP_PEA (Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum GN=GR PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.838e-56
Identity = 109/178 (61.24%), Postives = 138/178 (77.53%), Query Frame = -3
Query:  320 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRV 853
            V+V + G+++VDE S+ +VPSIWA+GD TNR+NLTPVALMEG+  AKT+F  +P KPDYR +P AVF  PP+  VGL+EEQA EQ  GDI VFT++F PM+ T+SG  ++  MKL+V AET  VLG  MCG +A EI QG AV +K G TKA FD+TVGIHP++AEEFVTMR+ TR+V
Sbjct:  356 VKVAKDGSIEVDEYSQTSVPSIWAIGDATNRVNLTPVALMEGVALAKTLFQNEPTKPDYRAIPSAVFSQPPIGGVGLTEEQAAEQ-YGDIDVFTANFRPMKATLSGLPDRVFMKLIVSAETNVVLGLHMCGEDAAEIAQGFAVGIKAGLTKADFDATVGIHPTAAEEFVTMRTPTRKV 532          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHRP_SOYBN (Glutathione reductase, chloroplastic OS=Glycine max GN=GR PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.124e-56
Identity = 110/184 (59.78%), Postives = 142/184 (77.17%), Query Frame = -3
Query:  302 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRVAAASSN 853
            V++ + GA++VDE S+ +V SIWAVGDVTNR+NLTPVALMEG    KT+F   P KPDYR VP AVF  PP+  VGL+EEQA++Q  GDI +FT++F P++ T+SG  ++  MKLVV A+T +VLG  MCG +APEI+QG AVALK   TKA FD+TVGIHPS+AEEFVTMR+ TR++  + S+
Sbjct:  348 VKLAKDGAIEVDEYSQTSVYSIWAVGDVTNRINLTPVALMEGGALVKTLFQDNPTKPDYRAVPSAVFSQPPIGQVGLTEEQAVQQ-YGDIDIFTANFRPLKATLSGLPDRVFMKLVVCAKTNEVLGLHMCGEDAPEIVQGFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKIRKSESS 530          
BLAST of CB290836 vs. ExPASy Swiss-Prot
Match: GSHR_BURCE (Glutathione reductase OS=Burkholderia cepacia GN=gor PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.842e-46
Identity = 94/173 (54.34%), Postives = 129/173 (74.57%), Query Frame = -3
Query:  335 VEVDQTGAVKVDENSRPNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 853
            V +DQ GA+KVDE SR + P I+AVGDVTNR+NLTPVA+ EG  FA TVFGG+    ++ +VP AVF  P  + VGLSE QA ++   ++ ++ S+F PMR  +SGR EK ++KLVV+   ++V+GA + G +A EI+QGIAVA+K  ATKA FD+T+G+HP+ AEEFVT+R+
Sbjct:  276 VGLDQNGAIKVDEYSRTSSPGIYAVGDVTNRLNLTPVAIHEGHAFADTVFGGKALPTEHENVPFAVFSQPQAASVGLSEAQARDR-YSNVEIYGSAFRPMRAALSGRDEKALVKLVVNGSNDRVVGAHIVGADAAEIIQGIAVAIKARATKADFDATLGVHPTLAEEFVTLRN 447          
The following BLAST results are available for this feature:
BLAST of CB290836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
GSHRC_PEA7.919e-8480.95Glutathione reductase, cytosolic OS=Pisum sativum ... [more]
GSHRC_ORYSJ7.919e-8480.42Glutathione reductase, cytosolic OS=Oryza sativa s... [more]
GSHRP_SPIOL1.351e-8382.54Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRC_ARATH1.264e-8178.31Glutathione reductase, cytosolic OS=Arabidopsis th... [more]
GSHRC_BRARP4.804e-8177.25Glutathione reductase, cytosolic OS=Brassica rapa ... [more]
GSHRP_TOBAC5.169e-5960.75Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRP_ARATH8.817e-5959.57Glutathione reductase, chloroplastic OS=Arabidopsi... [more]
GSHRP_PEA1.838e-5661.24Glutathione reductase, chloroplastic/mitochondrial... [more]
GSHRP_SOYBN9.124e-5659.78Glutathione reductase, chloroplastic OS=Glycine ma... [more]
GSHR_BURCE3.842e-4654.34Glutathione reductase OS=Burkholderia cepacia GN=g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dh02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dh02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290836 ID=CB290836; Name=CB290836; organism=Citrus sinensis; type=EST; length=855bp
TTTTTTTTTTTTTTTTTATTCAATAAAAAGATATGAAGATCCCGTATAAA
ATTACATTGTGTGTTTGCACCATCAGAATTAACCCCATTGTACAATATTT
TCGAAGATGAAACTTTTATTTAGGTGAAAATAAAAACCACAAAACTGGGC
TACTCCTGCTATACCAGCATTTTTCCCCCCTTTTTCCTGGGGGGGGGAAA
CGCGAAATACCTATATTCAAGCAAATAATGTTCCAACATAGTATAAATAT
CAAACCCGCTTCTCTCTGATATTTGATTGAACCTTACAGATTTGTCTTTG
GATTGCTGCTTGCGGCAGCAACACGTCTCGTCACAGACCGCATGGTCACG
AATTCCTCAGCAGAGGAAGGATGTATTCCCACCGTGCTGTCAAATTGTGC
CTTCGTAGCTCCACATTTCAGTGCAACAGCAATACCCTGCATTATCTCAG
GTGCTTCTGGCCCACACATTGATGCTCCAAGAACTTTTTCCGTCTCGGCA
TCCACCACTAGCTTCATTACTGTCTTCTCTTGCCGTCCAGAGATAGTGTT
CCTCATGGGATTGAAGCTTGATGTGAAAACAAGGATATCACCCTTTCCTT
GCTCTATGGCCTGCTCCTCACTGAGACCCACTACAGAGAGAGGAGGTATG
CAAAATACAGCACAGGGTACATCCCTGTAGTCTGGTTTGCAGGGTTGTCC
ACCAAAAACAGTTTTTGCAAAGCACATTCCCTCCATCAAGGCGACAGGGG
TAAGATTCATTCGATTAGTTACATCACCAACAGCCCATATACTAGGTACG
TTTGGGCGTGAGTTCTCGTCCACCTTCACAGCTCCTGTTTGATCAACTTC
CACAC
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