CB290837

Overview
NameCB290837
Unique NameCB290837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig155 contig Csv1_Contig155:1..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRC_PEA (Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.097e-84
Identity = 155/183 (84.70%), Postives = 167/183 (91.26%), Query Frame = 1
Query:  136 MARKMLNDGELSQPNQEEQTH-FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 681
            MARKMLNDGE      EEQ   +DFDLF+IGAGSGGVRAARFS+NFGAKVGICELPFHPISSE IGGVGGTCVIRGCVPKKILVYGAS+GGEL+DAR++GWE++E +DF+WKKLLQKKTDEI RLNGIYKRLLSNAGVKL+EGEGKI  PNEVEVTQLDGTKLSYSAKHILIATGSRAQR  I
Sbjct:    1 MARKMLNDGEPDLKKGEEQGKVYDFDLFIIGAGSGGVRAARFSSNFGAKVGICELPFHPISSETIGGVGGTCVIRGCVPKKILVYGASYGGELQDARNFGWELNENVDFNWKKLLQKKTDEINRLNGIYKRLLSNAGVKLFEGEGKIASPNEVEVTQLDGTKLSYSAKHILIATGSRAQRPNI 183          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRC_ARATH (Glutathione reductase, cytosolic OS=Arabidopsis thaliana GN=At3g24170 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.583e-83
Identity = 150/184 (81.52%), Postives = 168/184 (91.30%), Query Frame = 1
Query:  136 MARKMLNDGELSQPNQEEQ--THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 681
            MARKML DGE+ +   +E   TH+DFDLFVIGAGSGGVRAARFSAN GAKVGICELPFHPISSE IGGVGGTCVIRGCVPKKILVYGA++GGELEDA++YGWE++EK+DF WKKLLQKKTDEILRLN IYKRLL+NA VKLYEGEG++VGPNEVEV Q+DGTK+SY+AKHILIATGSRAQ+  I
Sbjct:    1 MARKMLVDGEIDKVAADEANATHYDFDLFVIGAGSGGVRAARFSANHGAKVGICELPFHPISSEEIGGVGGTCVIRGCVPKKILVYGATYGGELEDAKNYGWEINEKVDFTWKKLLQKKTDEILRLNNIYKRLLANAAVKLYEGEGRVVGPNEVEVRQIDGTKISYTAKHILIATGSRAQKPNI 184          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRP_SPIOL (Glutathione reductase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.701e-83
Identity = 149/167 (89.22%), Postives = 161/167 (96.41%), Query Frame = 1
Query:  181 QEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 681
            +++  ++DFDLFVIGAGSGGVRAARFSAN GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDA++YGWE++EKIDF+WKKLLQKKTDEI+RLN IYKRLLSNAGVKLYEGEGKIVGPNEV+VTQLDGTKLSYSAKHILIATGSRAQR  I
Sbjct:    8 EDDAANYDFDLFVIGAGSGGVRAARFSANLGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDAKNYGWELNEKIDFNWKKLLQKKTDEIIRLNNIYKRLLSNAGVKLYEGEGKIVGPNEVQVTQLDGTKLSYSAKHILIATGSRAQRPNI 174          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRC_BRARP (Glutathione reductase, cytosolic OS=Brassica rapa subsp. pekinensis GN=GR1 PE=2 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 1.026e-82
Identity = 150/187 (80.21%), Postives = 168/187 (89.84%), Query Frame = 1
Query:  136 MARKMLNDGELSQP-----NQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 681
            MARKML+DGEL++          +TH+DFDLFVIGAGSGGVRAARFSAN GAKVGICELPFHPISSE IGGVGGTCVIRGCVPKKILVYGA++GGELEDAR+YGWE++  +DF+WKKLLQKKTDEILRLN IYKRLL+NA VKLYEGEG+IVGPNEVEV Q+DGTK+SY+AKHILIATGSRAQ+  I
Sbjct:    1 MARKMLSDGELNKAAAAGEEATTETHYDFDLFVIGAGSGGVRAARFSANNGAKVGICELPFHPISSEEIGGVGGTCVIRGCVPKKILVYGATYGGELEDARNYGWEINGNVDFNWKKLLQKKTDEILRLNNIYKRLLANAAVKLYEGEGRIVGPNEVEVRQIDGTKISYTAKHILIATGSRAQKPNI 187          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRC_ORYSJ (Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica GN=GRC2 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 6.916e-63
Identity = 118/182 (64.84%), Postives = 147/182 (80.77%), Query Frame = 1
Query:  136 MARKMLNDGELSQPNQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 681
            MARKML D E+     +  + +D+DLFVIGAGSGGVR +R SA+FGAKV ICELPFHPISS+  GG GGTCVIRGCVPKKILVYG+SF GE EDA+++GWE++  I+F+WK+LL+ KT EI+RLNG+Y+R+L N+GV + EG G +V  + VEVT+ DG+K  Y+AKHILIATGSRAQR  I
Sbjct:    1 MARKMLKDEEVEVAVTDGGS-YDYDLFVIGAGSGGVRGSRTSASFGAKVAICELPFHPISSDWQGGHGGTCVIRGCVPKKILVYGSSFRGEFEDAKNFGWEINGDINFNWKRLLENKTQEIVRLNGVYQRILGNSGVTMIEGAGSLVDAHTVEVTKPDGSKQRYTAKHILIATGSRAQRVNI 181          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRP_TOBAC (Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.448e-46
Identity = 92/156 (58.97%), Postives = 114/156 (73.08%), Query Frame = 1
Query:  196 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR 663
            H+DFDLF IGAGSGGVRA+RF++NFGA V +CELPF  ISS+  GGVGGTCV+RGCVPKK+LVY + +  E E++  +GW    +  FDW  L+  K  E+ RL GIYK +L NAGV L EG GK+V P+ V+V   DG KL YSAK+ILI+ G R
Sbjct:   77 HYDFDLFTIGAGSGGVRASRFASNFGASVAVCELPFSTISSDSTGGVGGTCVLRGCVPKKLLVYASKYSHEFEESCGFGWNYDVEPRFDWSTLIANKNAELQRLTGIYKNILKNAGVTLIEGRGKVVDPHTVDV---DG-KL-YSAKNILISVGGR 227          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRP_PEA (Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum GN=GR PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.448e-46
Identity = 94/165 (56.97%), Postives = 113/165 (68.48%), Query Frame = 1
Query:  169 SQPNQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR 663
            SQ   +    +DFDLF IGAGSGGVRA+RF++NFGA   +CELPF  ISS+  GGVGGTCVIRGCVPKK+LVY + F  E E++  +GW    +   DW  L+  K  E+ RL GIYK  L NAGVKL EG GKIV  + V+V   DG KL YSAKHIL++ G R
Sbjct:   62 SQNGADPARQYDFDLFTIGAGSGGVRASRFASNFGASSAVCELPFSTISSDTTGGVGGTCVIRGCVPKKLLVYASKFSHEFEESNGFGWRYDSEPKHDWSSLIANKNAELQRLTGIYKNTLKNAGVKLIEGRGKIVDAHTVDV---DG-KL-YSAKHILVSVGGR 221          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRP_SOYBN (Glutathione reductase, chloroplastic OS=Glycine max GN=GR PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46
Identity = 92/156 (58.97%), Postives = 110/156 (70.51%), Query Frame = 1
Query:  196 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR 663
            H+DFDLF IGAGSGGVRA RF+AN+GA V ICELPF  ISSE  G VGGTCVIRGCVPKK+LVY + F  E E++  +GW    +   DW   +  K  E+ RL GIYK +L+NAGVKL EG GK++ P+ V+V      KL YSAKHIL+A G R
Sbjct:   64 HYDFDLFTIGAGSGGVRARRFAANYGASVAICELPFSTISSETTG-VGGTCVIRGCVPKKLLVYASKFSHEFEESNGFGWRYDSEPKHDWSSFIANKNAELQRLTGIYKNILNNAGVKLIEGHGKMIDPHTVDV----NGKL-YSAKHILVAVGGR 213          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHRP_ARATH (Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.504e-45
Identity = 86/160 (53.75%), Postives = 110/160 (68.75%), Query Frame = 1
Query:  184 EEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR 663
            E   H+DFDLF IGAGSGGVRA+RF+ +FGA   +CELPF  ISS+  GGVGGTCV+RGCVPKK+LVY + +  E ED+  +GW+   +   DW  L+  K  E+ RL GIYK +LS A VKL EG GK++ P+ V+V   DG    Y+ ++ILIA G R
Sbjct:   81 ESDRHYDFDLFTIGAGSGGVRASRFATSFGASAAVCELPFSTISSDTAGGVGGTCVLRGCVPKKLLVYASKYSHEFEDSHGFGWKYETEPSHDWTTLIANKNAELQRLTGIYKNILSKANVKLIEGRGKVIDPHTVDV---DGK--IYTTRNILIAVGGR 235          
BLAST of CB290837 vs. ExPASy Swiss-Prot
Match: GSHR_PSEAE (Glutathione reductase OS=Pseudomonas aeruginosa GN=gor PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38
Identity = 86/157 (54.78%), Postives = 104/157 (66.24%), Query Frame = 1
Query:  199 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ 669
            FDFDLFVIGAGSGGVRAARF+A FGA+V + E  +          +GGTCV  GCVPKK+LVYGA F  + E AR+YGW   E   FDW  L+  K  EI RLNGIY+ LL N+GV L EG  +++  + VEV   DG +  +SAKHIL+ATG   Q
Sbjct:    3 FDFDLFVIGAGSGGVRAARFAAGFGARVAVAESRY----------LGGTCVNVGCVPKKLLVYGAHFSEDFEQARAYGWSAGE-AQFDWATLIGNKNREIQRLNGIYRNLLVNSGVTLLEGHARLLDAHSVEV---DGQR--FSAKHILVATGGWPQ 143          
The following BLAST results are available for this feature:
BLAST of CB290837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
GSHRC_PEA1.097e-8484.70Glutathione reductase, cytosolic OS=Pisum sativum ... [more]
GSHRC_ARATH1.583e-8381.52Glutathione reductase, cytosolic OS=Arabidopsis th... [more]
GSHRP_SPIOL2.701e-8389.22Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRC_BRARP1.026e-8280.21Glutathione reductase, cytosolic OS=Brassica rapa ... [more]
GSHRC_ORYSJ6.916e-6364.84Glutathione reductase, cytosolic OS=Oryza sativa s... [more]
GSHRP_TOBAC3.448e-4658.97Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRP_PEA3.448e-4656.97Glutathione reductase, chloroplastic/mitochondrial... [more]
GSHRP_SOYBN7.682e-4658.97Glutathione reductase, chloroplastic OS=Glycine ma... [more]
GSHRP_ARATH6.504e-4553.75Glutathione reductase, chloroplastic OS=Arabidopsi... [more]
GSHR_PSEAE7.700e-3854.78Glutathione reductase OS=Pseudomonas aeruginosa GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dh02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dh02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290837 ID=CB290837; Name=CB290837; organism=Citrus sinensis; type=EST; length=683bp
CCATTCATAAACAAATTTTTTCGATCGTTTTTATTTCATCAATTACGACA
GCATAGTCATTAGTCATTGCTGCAGCAGCCTCTGCTTTTCTTTCAATTCC
TTAACTCATCTCTTAGTTGAATTGATTAAAGAGCGATGGCAAGGAAGATG
CTTAACGATGGCGAGCTGAGCCAGCCCAATCAAGAAGAACAAACTCATTT
TGACTTCGACTTGTTTGTTATTGGAGCTGGAAGTGGTGGTGTTCGTGCTG
CTCGATTTTCGGCTAATTTTGGAGCCAAGGTTGGGATATGCGAGCTTCCT
TTTCATCCGATCAGCTCTGAAGTAATTGGGGGAGTTGGTGGAACCTGTGT
CATTCGTGGTTGTGTACCCAAAAAGATATTGGTCTATGGAGCATCATTTG
GAGGTGAACTTGAGGATGCAAGGAGTTATGGATGGGAGGTACACGAGAAA
ATTGACTTCGACTGGAAAAAACTTCTGCAAAAGAAGACAGATGAGATACT
CAGATTAAATGGAATTTACAAGCGATTATTATCTAATGCTGGGGTAAAAT
TATATGAAGGGGAGGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACA
CAACTAGATGGCACTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGC
AACTGGAAGTAGGGCTCAACGTGCTCCTATTCC
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