CB293386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VATM_DICDI (Vacuolar proton translocating ATPase 100 kDa subunit OS=Dictyostelium discoideum GN=vatM PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.882e-33 Identity = 79/215 (36.74%), Postives = 132/215 (61.40%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL-----SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQ-IKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQA 773 ++RS PMQ+VQ+ + IE+AH TV LG+LGL+QF D N + FQR + ++K+C +M +KL+FF++Q+ K L ++ S D+ D+LE + +LE+EL ++NAN + LQR ++EL++ + VL K FF + + + E + +PLL + + ++ +KQ +KLGFI G++ +K F+R L+R TRGN +++ A Sbjct: 8 IWRSSPMQMVQLFVQIEAAHDTVDELGKLGLIQFLDDNEHVNLFQRNFVNEVKRCDDMEKKLKFFEDQVKKEPKLQKLLPDNMLSVVDDDSQMDELEGRFDELESELKQVNANQETLQRNYNELIQLRHVLTKDSVFFQ--------ENPNLIEGEGHEHSARSPLLAEDQHVSEVAKQGVKLGFITGVMNTDKMPQFQRSLWRTTRGNNYVKDA 214
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 9.342e-33 Identity = 85/218 (38.99%), Postives = 124/218 (56.88%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTI---ETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS LGELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF A E+ QQ + + + LL EM ++LGF+AG++ RE+ +FERM +R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEA---------ELHHQQMADPDLLEESSSLLEPNEMGR--GAPLRLGFVAGVINRERIPTFERMFWRVCRGNVFLRQAEI 209
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_XENLA (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.636e-32 Identity = 85/215 (39.53%), Postives = 121/215 (56.28%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS LGELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF A +E T LL EM ++LGF+AG++ RE+ +FERML+R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEVKKANISILDTGENPEVPFPRDIIDLEANFEKIEIELKEINTNQEALKRNFLELTELKFILRKTQQFFDE-----MADPDLLEESST--------LLEPSEMGR--GAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAQI 202
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_XENTR (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus tropicalis GN=atp6v0a1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.909e-32 Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS LGELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF E + + LL EM ++LGF+AG++ RE+ +FERML+R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEVKKANISILDTGENPEVPFPRDMIDLEANFEKIEIELKEINTNQEALKRNFLELTELKFILRKTQQFFD-------------EMADPDLLEESSSLLEPSEMGR--GAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEI 202
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 7.909e-32 Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS LGELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF + + + EM TPL +LGF+AG++ RE+ +FERML+R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDE-MADPDLLEESSSLLEPSEMGRGTPL--------------RLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEI 202
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.909e-32 Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS LGELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF + + + EM TPL +LGF+AG++ RE+ +FERML+R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDE-MADPDLLEESSSLLEPSEMGRGTPL--------------RLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEI 202
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_PONAB (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.349e-31 Identity = 84/215 (39.07%), Postives = 121/215 (56.28%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS LGELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF + GE + LL EM ++LGF+AG++ RE+ +FERML+R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEM----------ADPDLLGE---SSSLLEPSEMGR--GTPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEI 202
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_CHICK (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.349e-31 Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS LGELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF E + + LL EM ++LGF+AG++ RE+ +FERML+R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIKKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFD-------------EMADPDLLEESSSLLEPSEMGR--GAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEI 202
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_RAT (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.142e-30 Identity = 82/215 (38.14%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 144 DLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 +LFRSE M L Q+ + E+A+ VS L ELG +QF+DLN + + FQR + ++++C EM RKLRF ++++ KA I + + DLE +E EL EIN N + L+R EL E K +L+K +FF E + + LL EM ++LGF+AG++ RE+ +FERML+R RGNVFLRQA + Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFD-------------EMADPDLLEESSSLLEPNEMGR--GAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEI 202
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP1_CAEEL (Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 6.266e-29 Identity = 81/233 (34.76%), Postives = 128/233 (54.94%), Query Frame = 3 Query: 135 PPMDLFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGIL---SSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSA-------LTSAAAQQ-REMESQQTGEMTIETPLLTDKEMSADPSKQ-------IKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 P ++RSE M L Q+ + ++++ V+ LGELGL+QF+DLN + S FQR Y ++++C EM RKLR+ + ++ K I + DLE LE EL E+N N + L++ SEL E K +L+K FF L + ++ R E ++T PL+ +M D + + ++LGF+AG++ RE+ +FER+L+RA RGNVFLR + + Sbjct: 12 PQPGIYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMERKLRYLEREIKKDQIPMLDTGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNFSELTELKHILRKTQTFFEEVDHDRWRILEGGSGRRGRSTEREET------RPLIDIGDMDDDSAARMSAQAAMLRLGFVAGVIQRERLPAFERLLWRACRGNVFLRTSEI 238 The following BLAST results are available for this feature:
BLAST of CB293386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293386 ID=CB293386; Name=CB293386; organism=Citrus sinensis; type=EST; length=781bpback to top |