CB293396

Overview
NameCB293396
Unique NameCB293396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3988 contig Csv1_Contig3988:35..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.304e-83
Identity = 156/197 (79.19%), Postives = 167/197 (84.77%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKDRDGYWKWFAGN            LFVYSLDYARTRLANDAKAAKKGGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  MQDSF ASF+LGW IT GA LASYPIDTVRRRMMMTSG+AVKYKSSL AF +I+KNEG KSLFKGAG+NILR         GYDKLQL++F
Sbjct:  181 KKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSMQDSFFASFVLGWLITNGAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGAGVLAGYDKLQLIVF 377          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.548e-82
Identity = 154/196 (78.57%), Postives = 164/196 (83.67%), Query Frame = -1
Query:  266 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVL 853
            KKDRDGYWKWFAGN             FVYSLDYARTRLAND KA+KKGGERQFNGL+DVYKKTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  +QDSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AF +I+KNEG KSLFKGAGANILR         GYDKLQ+++
Sbjct:  181 KKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDRKASKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGNLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLV 376          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 303.908 bits (777), Expect = 7.412e-82
Identity = 152/197 (77.16%), Postives = 164/197 (83.25%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AFQ+I+K EG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  182 KKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGNLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.264e-81
Identity = 151/197 (76.65%), Postives = 163/197 (82.74%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKD+DGYWKWF GN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPVVLT  +QD+F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSS+ AF +I+KNEG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  177 KKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 373          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.651e-81
Identity = 151/197 (76.65%), Postives = 164/197 (83.25%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GG+RQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AFQ+I+K EG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  182 KKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGDRQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 8.195e-81
Identity = 153/198 (77.27%), Postives = 167/198 (84.34%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKDRDGYWKWFAGN            LFVYSLDYARTRLANDAKAAKKGG  RQF+GL+DVY+KTLK+DGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AF++I+KNEG KSLFKGAGANILR         GYDKLQL++F
Sbjct:  175 KKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVF 372          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.384e-80
Identity = 152/198 (76.77%), Postives = 165/198 (83.33%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKDRDGYWKWFAGN            LFVYSLDYARTRLANDAKAAKKGG  RQF+GL+DVY+KTLKSDG+AGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  M+DSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSS  AF +I+KNEG KSLFKGAGAN+LR         GYDKLQ+++F
Sbjct:  180 KKDRDGYWKWFAGNLASGGGAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMEDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFNQILKNEGPKSLFKGAGANVLRAVAGAGVLAGYDKLQVIVF 377          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 4.067e-80
Identity = 151/198 (76.26%), Postives = 164/198 (82.83%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGG-ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKD+DGYWKWFAGN            LFVYSLDYARTRLAND+K+AKKGG ERQFNGL+DVYKKTLKSDGIAGLYRGF+ISC GIIVYRGLYFG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSS  AF +I+K EG KSLFKGAGANILR         GYDKLQL++F
Sbjct:  179 KKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCAGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIVKKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVF 376          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.443e-79
Identity = 148/197 (75.13%), Postives = 161/197 (81.73%), Query Frame = -1
Query:  263 KKDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVLF 853
            KKD+DGYWKWF GN             FVYSLDYARTRLANDAKA+K GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDSLKPV+LT  +Q  F ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AFQ+I+K EG KSLFKGAGANILR         GYD+LQ++ F
Sbjct:  126 KKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKASKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSLKPVLLTGTLQVCFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 322          
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.209e-77
Identity = 144/196 (73.47%), Postives = 162/196 (82.65%), Query Frame = -1
Query:  266 KDRDGYWKWFAGNXXXXXXXXXXXXLFVYSLDYARTRLANDAKAAKKGG-ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXGYDKLQLVL 850
            KD++ YWKWFAGN             FVYSLDYARTRLANDAK+AKKGG +RQFNGL+DVY+KT+ SDGIAGLYRGF+ISCVGI+VYRGLYFGMYDSLKPVVL   + ++FLA+FLLGWGITIGAGLASYPIDT+RRRMMMTSG AVKY SS H FQEI+KNEG KSLFKGAGANILR         GYD+LQ++L
Sbjct:  104 KDKE-YWKWFAGNMASGGAAGAVSLSFVYSLDYARTRLANDAKSAKKGGGDRQFNGLVDVYRKTIASDGIAGLYRGFNISCVGIVVYRGLYFGMYDSLKPVVLVGPLANNFLAAFLLGWGITIGAGLASYPIDTIRRRMMMTSGSAVKYNSSFHCFQEIVKNEGMKSLFKGAGANILRAVAGAGVLAGYDQLQVIL 298          
The following BLAST results are available for this feature:
BLAST of CB293396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
ADT1_GOSHI2.304e-8379.19ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_SOLTU2.548e-8278.57ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT1_MAIZE7.412e-8277.16ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT_ORYSJ1.264e-8176.65ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_MAIZE1.651e-8176.65ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT1_ARATH8.195e-8177.27ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT2_SOLTU2.384e-8076.77ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT2_ARATH4.067e-8076.26ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT1_WHEAT3.443e-7975.13ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT_CHLRE4.209e-7773.47ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ac01_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293396 ID=CB293396; Name=CB293396; organism=Citrus sinensis; type=EST; length=853bp
TTTTTTTTTTTTTTTTTCAGTGAAAACTATTTAAATTATCATTCAACACT
TGAGTCTAGGGCTCAAGCACAAAAACACTCAAATTCAAACAGTTCTTTGA
CGACTATAATCTTTTCTTTTATCAAATCCCTAAAAACCGGATAAATATTA
ATAACACTATCGATCATCCAAAATTATTCAAACTTGAGAAGAGCACCTAT
AGAATTTTCACCAACATCTTGTACAAGTATTAACCGCCACCACCGGATCC
GTATTTCTTGCCAAATAAAACCAGCTGCAGCTTGTCATAACCGGCAAGCA
CACCAGCACCTGCCACAGCACGCAGAATGTTTGCACCAGCACCTTTGAAG
AGTGATTTAGTGCCTTCATTCTTTATAATTTCCTGGAATGCATGCAAAGA
GCTCTTGTACTTCACAGCTTCTCCAGAGGTCATCATCATCCTTCTACGCA
CCGTATCAATTGGGTAAGAAGCCAAACCAGCACCAATTGTGATTCCCCAG
CCAAGTAAGAAGCTAGCCAAGAAACTATCCTGCATCCCATCAGTCAACAC
CACAGGTTTTAGAGAATCGTACATTCCAAAGTAGAGCCCACGATACACTA
TAATTCCAACACATGAGATGCTGAATCCACGGTAGAGCCCAGCAATGCCA
TCAGATTTCAGAGTCTTCTTGTAGACATCAATCAAACCATTAAACTGCCT
TTCCCCACCCTTTTTAGCTGCCTTAGCATCATTTGCCAAACGTGTTCTTG
CATAGTCAAGCGAATACACAAAAAGAAGCGATGAAGCACCAGCAGCCCCA
CCAGATGCCAAGTTCCCAGCAAACCACTTCCAGTAGCCATCTCTGTCTTT
CTT
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