CB293397

Overview
NameCB293397
Unique NameCB293397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1975 contig Csv1_Contig1975:19..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.479e-86
Identity = 166/248 (66.94%), Postives = 186/248 (75.00%), Query Frame = 3
Query:   60 YPSVFQKMQGQSYFIS-----------GVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            +P+VFQK   Q    S           GV P +Y  +++  G++ N G Q     A+Q   L + S  SP+FVQAP EK  ++F  DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLS PYKGI +CFGRT+K+EG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLAND KA+KKGGERQFNGL+DVYKKTLKSDGI
Sbjct:    7 HPTVFQKAANQLDLRSSLSQDVHARYGGVQPAIYQRHFAY-GNYSNAGLQRG--QATQDLSL-ITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDRKASKKGGERQFNGLVDVYKKTLKSDGI 250          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.230e-85
Identity = 164/253 (64.82%), Postives = 189/253 (74.70%), Query Frame = 3
Query:   48 ADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVA-----------GSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVYKKTLKSDGI 770
            AD  +P+V+QK+  Q +  S +S +++A    +            G++ N G Q     A+Q   L + +  SP+FVQAP EK L++F  DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKK GG RQF+GL+DVY+KTLKSDG+
Sbjct:    1 ADNQHPTVYQKVASQMHLSSSLSQDVHARYGGIQRPALSQRRFPYGNYSNAGLQTC--QATQDLSL-IAANASPVFVQAPQEKGLAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFAALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGGAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKSDGV 250          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.607e-85
Identity = 172/249 (69.08%), Postives = 185/249 (74.30%), Query Frame = 3
Query:   60 YPSVFQKMQGQ-----------SYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALV-SPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            +PSV QK+ GQ            Y  S  SP LY    +  G++ N   Q+   A      L++V S  S I VQAP+EK  SSF +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKKGGERQFNGL+DVY+KTLKSDGI
Sbjct:    6 HPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRR-AAYGNYSNAALQHPVRAFGD---LSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGI 250          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.974e-85
Identity = 162/240 (67.50%), Postives = 182/240 (75.83%), Query Frame = 3
Query:   63 PSVFQKMQGQSYFISGVSPNLYAHNYSVA-GSFVNRGSQNSFWA---ASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            P+V QK  GQ +  S  S  + A N   +  S+  R +  S+      + G  + ++S  SPIF  AP+EK   +F++DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWF GN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGI
Sbjct:    8 PTVLQKFGGQFHLGSSFSEGVRARNICPSVSSYDRRFTTRSYMTQGLVNGGINVPMMSS-SPIFANAPAEKGGKNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGI 246          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.041e-84
Identity = 161/249 (64.66%), Postives = 186/249 (74.70%), Query Frame = 3
Query:   60 YPSVFQKMQGQ-----------SYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVYKKTLKSDGI 770
            +P++ QK+ GQ            Y  +   P  Y   ++  G++ N   Q    AASQ     + +  SP+FVQAP EK  ++F +DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRL+ PYKGI DCFGRT++DEGI SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWFAGN             FVYSLDYARTRLAND+K+AKK GGERQFNGL+DVYKKTLKSDGI
Sbjct:    7 HPTILQKVSGQLLSSSVSQDIRGYASASKRPATY-QKHAAYGNYSNAAFQYPLVAASQ-----IATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGIGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGGERQFNGLVDVYKKTLKSDGI 249          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 312.768 bits (800), Expect = 1.360e-84
Identity = 162/244 (66.39%), Postives = 180/244 (73.77%), Query Frame = 3
Query:   63 PSVFQKMQGQSYFISGVSPNLYAHNYSVAGS-----FVNRGSQN-SFWAASQGTGLALVSPV--SPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            P+V  K+ GQ +  S  S  + A N   + S     F  R     S W  S      +  PV  +P+F  AP+EK   +F++DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI+DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GG+RQFNGL+DVY+KTLKSDGI
Sbjct:    8 PTVLHKLGGQFHLSSSFSEGVRARNICPSFSPYERRFATRNYMTQSLWGPSMSVSGGINVPVMPTPLFANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGDRQFNGLVDVYRKTLKSDGI 251          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 309.686 bits (792), Expect = 1.151e-83
Identity = 162/244 (66.39%), Postives = 181/244 (74.18%), Query Frame = 3
Query:   63 PSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNR--GSQN----SFWAASQGTGLALVSPV--SPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            P+V  K+ GQ +  S +S  + A N   + S   R   ++N    S W  S      +  PV  +P+   AP+EK   +F++DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGI
Sbjct:    8 PTVLHKLGGQFHLRSIISEGVRARNICPSVSSYERRFATRNYMTQSLWGPSMSVSGGINVPVMQTPLCANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGI 251          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.663e-82
Identity = 162/247 (65.59%), Postives = 183/247 (74.09%), Query Frame = 3
Query:   60 YPSVFQKMQGQSYFISGVS---------PNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVYKKTLKSDGI 770
            +P++ QK  GQ +  S VS         P++Y   ++  G++ N   Q         T   L +  SP+FVQ P EK  ++F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKK GG RQF+GL+DVY+KTLK+DGI
Sbjct:    7 HPTIAQKAAGQ-FMRSSVSKDVQVGYQRPSMY-QRHATYGNYSNAAFQ------FPPTSRMLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKTDGI 245          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.654e-80
Identity = 147/191 (76.96%), Postives = 161/191 (84.29%), Query Frame = 3
Query:  201 GTGLALVSPVSPIFVQAPSEKS-LSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            G  + ++SP SP+F  AP EK  + +F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDYARTRLANDAKA+K GGERQFNGL+DVY+KTLKSDGI
Sbjct:    6 GISVPIMSP-SPMFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKASKGGGERQFNGLVDVYRKTLKSDGI 195          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 8.539e-79
Identity = 142/181 (78.45%), Postives = 154/181 (85.08%), Query Frame = 3
Query:  231 SPIFVQAPSEKS-LSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SP+F  AP EK  + +F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDY RTRLANDAKA+K GG+RQFNGL+DVY+KTLKSDGI
Sbjct:   15 SPLFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYGRTRLANDAKASKGGGDRQFNGLVDVYRKTLKSDGI 195          
The following BLAST results are available for this feature:
BLAST of CB293397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
ADT1_SOLTU2.479e-8666.94ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_SOLTU1.230e-8564.82ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_GOSHI1.607e-8569.08ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT_ORYSJ7.974e-8567.50ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_ARATH1.041e-8464.66ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT2_MAIZE1.360e-8466.39ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT1_MAIZE1.151e-8366.39ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT1_ARATH1.663e-8265.59ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_WHEAT2.654e-8076.96ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT2_WHEAT8.539e-7978.45ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ac01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293397 ID=CB293397; Name=CB293397; organism=Citrus sinensis; type=EST; length=772bp
GCCCTTAGAGCGACCTTCTCAGGTCACCATCTTCAGCTGCAACTTTGGCA
GATGGATCGTATCCATCCGTATTTCAGAAAATGCAAGGCCAGTCATACTT
CATTTCTGGGGTCTCCCCCAATTTGTATGCCCACAACTACAGTGTGGCAG
GTTCCTTTGTTAATAGAGGATCACAGAATTCTTTTTGGGCAGCAAGTCAG
GGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCCTATATTCGTACAAGC
TCCATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGGATTTTCTCATGGGAG
GAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTGCTCCTATTGAGCGGGTT
AAGCTTTTGATTCAGAATCAAGATGAGATGATCAAGAGTGGTCGGCTCTC
GCATCCGTACAAGGGGATTTCTGATTGCTTTGGTAGAACTGTTAAGGATG
AAGGCATACTATCTCTTTGGAGAGGCAACACTGCCAATGTTATCAGATAC
TTCCCTACCCAGGCCCTGAACTTTGCATTCAAGGATTACTTTAAGAGGCT
GTTTAACTTCAAGAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGA
ACTTGGCATCTGGTGGGGCTGCTGGTGCTTCATCGCTTCTTTTTGTGTAT
TCGCTTGACTATGCAAGAACACGTTTGGCAAATGATGCTAAGGCAGCTAA
AAAGGGTGGGGAAAGGCAGTTTAATGGTTTGATTGATGTCTACAAGAAGA
CTCTGAAATCTGATGGCATTGC
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