CB293398

Overview
NameCB293398
Unique NameCB293398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig305 contig Csv1_Contig305:289..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.061e-44
Identity = 88/140 (62.86%), Postives = 106/140 (75.71%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            SKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:   34 SKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.061e-44
Identity = 88/140 (62.86%), Postives = 106/140 (75.71%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            SKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:   34 SKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.547e-42
Identity = 84/140 (60.00%), Postives = 103/140 (73.57%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            SKC+K++++K++QAKLAASSI SIVN           A+ +  V  + VE K + VQP+  +  SE V   PK  EGP+RC++C+KRVGLTGF CRCGN+YC  HRYSDKH C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:   34 SKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 9.373e-37
Identity = 79/144 (54.86%), Postives = 104/144 (72.22%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNG--SESVAAATVDVQASSVEPKIISVQPSCASELSESVE----AKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            SKC+KD++ +Q+Q    AS++      TSSS+    E+  AA VD++  SVEP  +SVQPS    ++E V     AKPK GPSRC++C KRVGLTGFKCRCG+L+C +HRY+D H+C F+Y  AA++AI KANPV+KAEKLDKI
Sbjct:   35 SKCHKDMLFQQEQGAKFASAVSG----TSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPK-GPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24
Identity = 51/141 (36.17%), Postives = 90/141 (63.83%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSC---ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            SKCY+ +  ++DQ  +A +++ + +   S S  +       ++++ + +E  +++ +PS    A+E  E+  ++P    +RC SC K+VG+ GFKC+CG+ +C SHRY +KH C FD++   RDAI KANP++KA+K+ +I
Sbjct:   36 SKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPG-QKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23
Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            SKCY+DI   ++Q   A +++   +N        +     T  V  S           S A+ L       PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++  AR+AI KANPV+KA+K+D+I
Sbjct:   36 SKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDP-----PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23
Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSE--------SVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            S CY D+ LKQ Q    +SSI S V E+S S    S +++ +   +S + P ++   PS   E+ E        + E   ++ P+RC++C+KRVGLTGFKCRCG ++C  HRY + H C +D+++A R+ I KANP++KA KL KI
Sbjct:   33 SNCYGDLCLKQQQQ---SSSIKSTV-ESSLSVSPPSSSSSEI---SSPIIPPLLK-NPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = -1
Query:  442 LAASSIGSIVNETSSSNGSESVAAATVD-----VQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 801
            LAAS+  S  +  +S + +       V+     VQ+S+     + V+   A  +  S +A      +RC SC++RVGLTGF+CRCG LYC +HRYSD+H+C FDY++AARDAI + NPV++A K+
Sbjct:   43 LAASASSSSSSAAASPSTTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKI 167          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.927e-22
Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = -1
Query:  433 QAKLAASSIGSIVNETSSSNGS---ESVAAATVDV--------QASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 810
            +A+ A  S  S V  +  SN S   ESVA++ VD         +   ++  +       + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:   73 EAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CB293398 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.517e-22
Identity = 55/138 (39.86%), Postives = 80/138 (57.97%), Query Frame = -1
Query:  433 SKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 846
            SKCY+D +       +AA  +       +SS+ +    A   +V A++VE K  + +P             PK   +RC SC+K+VGLTGF+CRCG  +C +HRY++ H+C FDY+ A RD I K NPV+ AEK++KI
Sbjct:   40 SKCYRDFV---KVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEP-------------PKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161          
The following BLAST results are available for this feature:
BLAST of CB293398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP8_ORYSJ6.061e-4462.86Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI6.061e-4462.86Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ2.547e-4260.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH9.373e-3754.86Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH4.085e-2436.17Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH1.188e-2339.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH2.027e-2341.78Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ1.006e-2242.40Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_BOVIN2.927e-2241.61AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP9_ORYSJ8.517e-2239.86Zinc finger A20 and AN1 domain-containing stress-a... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_06ac02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293398 ID=CB293398; Name=CB293398; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTTGATAGAAACCATAATTAAAAATCCTTTGAGGCT
AAGCGCAAGAATTGTCCATGTATGTTTTCCCCCTCATATGGAAATAGCAC
AACCATCTTTTTCTGAATTTTTTTTTTTAAGCAGAAACTAATAAAGTGAA
ATGCCATATGAAACATAATGACAAATTGGAAAGCTATCCAAAAGTCCATA
AAACCAGAGCACAGATTCACTCTTAAACACTGAAGCCAACATATAAGTTC
TCGCCAACACACGACATAGAGTTCTTCATACTGCAAAGATGTCCTATAAC
TGATAATGGGCCCCCAGCATATATAACATTAAAGGACACCTGATAAGATA
CGTGGCCTTCTCAGAAGAAGCCTCTAACAGATGAGCAAGATCATCATTCT
TTGATTATTGAAACCTCATCCCATTGAATCTAGATTTTATCTAGCTTCTC
AGCCTTGATCACAGGGTTTGCTTTAATTATAGCATCCCTAGCAGCAGTGC
GGTAGTCAAAGGGGCAGTTATGTTTGTCCGAATAGCGATGTGACACACAG
TATAAGTTACCACAGCGACATTTGAATCCTGTTAAACCAACACGCTTCTT
GCAACTGCTGCACCGGCTGGGACCCTCCTTCGGCTTTGCCTCCACACTCT
CGCTCAATTCTGAAGCACATGATGGCTGCACAGAGATGATTTTTGGCTCC
ACTGAACTAGCTTGCACATCAACAGTGGCAGCAGCAACAGATTCACTTCC
ATTGCTGCTTGACGTTTCATTCACAATGCTTCCAATAGATGAAGCAGCAA
GCTTAGCTTGATCCTGTTTCAGCATTATATCCTTGTAGCATTTGGA
back to top