CB293409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.412e-60 Identity = 117/171 (68.42%), Postives = 130/171 (76.02%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPA---TQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 MS+ + I LKS DGE+FE++EAVALES TIKHMIEDDC DNGIPLPNVT KIL+KV+EYCK+HVE T +EDLK+WD++F+KVDQ TLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP NQWAFE Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.108e-60 Identity = 116/166 (69.88%), Postives = 128/166 (77.11%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 S K IVLKS DGESFEVEEAVALES TI HM+EDDC DNG+PLPNVT KILAKV+EYCK+HVE A++ ++DLK+WD DF+K+DQATLF+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTP NQWAFE Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASK-------AEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.047e-55 Identity = 107/164 (65.24%), Postives = 124/164 (75.61%), Query Frame = 2 Query: 50 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 KMI+LKS DGESFE+EEAVA++S TIKHMIEDDCADNGIPLPNVTG ILAKV+EYCKKHVE A ++LK+WD++FVKVDQ TLFDLILAANYLNI GLLDLTC+ VAD ++GKTPE++R FNIKND+TP N+WAFE Sbjct: 6 KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAE------NDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.800e-54 Identity = 105/164 (64.02%), Postives = 119/164 (72.56%), Query Frame = 2 Query: 50 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 KMI+LKS DGESFEVEEAVA+ES TIKHMIEDDC DNGIPLPNVTG ILAKV+EYCKKHVE A +LK+WD DFVKVD TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND+TP N+WAFE Sbjct: 6 KMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAA------EAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.325e-50 Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC +GIPL NV KIL KV+EYCKKH A EEDL +WD F+ ++Q+T+F+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDFTP NQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANP---------------ISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.913e-49 Identity = 102/167 (61.08%), Postives = 116/167 (69.46%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK-HVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC +GIPL NV KIL KV+EYCKK HV+ EEDL WD F+ ++Q+T+F+LILAANYLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDFTP NQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVD----------------EANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.853e-44 Identity = 92/166 (55.42%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 50 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKV--DQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 KM++L S DGESF+VEEAVA++S TI HMIEDDC NG+P+ NVTG IL+KV+EYCKKHV + + +++LK WD +F+K +TLFD++LAANYLNIK LLDL CQTVADMI GK P+EIR I+NDFTP NQWAFE Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTE--------------ESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.675e-43 Identity = 93/166 (56.02%), Postives = 105/166 (63.25%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 S K I+LKS DG SFEVEE A + TI HM EDDC DNGIPLP VTGKIL V+EYC KH V A +EDLK WD +F++ Q+T+FDLI+AANYLNIK LLDL CQTVADMIK T E RK FNI+ND+T NQW FE Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKH-HVDAANPCS--------------DEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 92/167 (55.09%), Postives = 109/167 (65.27%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALE-STTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 S K I+LKS DG SFEVEE A + I HM E+DC DNGIPLPNVTGKILA V+EYC KH V A ++DLK WD +F++ D +T+FDLI AANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND TP N+WAFE Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKH-HVDAANPCS--------------DDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.265e-42 Identity = 96/169 (56.80%), Postives = 111/169 (65.68%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 MSS K IVL S DGESFEVEEAVA + ++HMIEDDC +PL NVTGKIL+ VVEYCKKHV ++ K+WD +F+K DQ T+F L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDFTP N WAFE Sbjct: 1 MSSNK-IVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHV-------------------VDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149 The following BLAST results are available for this feature:
BLAST of CB293409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293409 ID=CB293409; Name=CB293409; organism=Citrus sinensis; type=EST; length=789bpback to top |