CB293550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_MAIZE (60S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19 Identity = 54/110 (49.09%), Postives = 66/110 (60.00%), Query Frame = -3 Query: 234 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 563 M++ ELAC YA LIL DDGIAIT +KIA +VKAAN+ +ESYWP+LFAKLLEKRN++DLI++ ESD+DMGFSLFD Sbjct: 1 MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILS-VGSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA13_ARATH (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana GN=RPP1C PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17 Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 + ELAC+YA +IL D+GIAIT DKIA LVKAA V IESYWP LFAK+ EKRN+ DLIMN Sbjct: 3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA12_ARATH (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana GN=RPP1B PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17 Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 + ELAC+YA +IL D+GIAIT+DKIA LVKAA V IESYWP LFAK+ EKRN+ DLIMN Sbjct: 3 TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA11_ARATH (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana GN=RPP1A PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17 Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 + ELAC+YA +IL D+GIAIT DKIA LVKAA V IESYWP LFAK+ EKRN+ DLIMN Sbjct: 3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_CHLRE (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 49/110 (44.55%), Postives = 57/110 (51.82%), Query Frame = -3 Query: 234 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 563 MS SELACTYA LILHDDG+ IT D I + KAA V +E YWP+LFAKL K+++DDLI N +EDMGFSLFD Sbjct: 1 MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLITN---VGAGGGAAPAAAAPAAGGAPAAGAAPKKEEKKEPSEEEDMGFSLFD 107
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA3_SCHPO (60S acidic ribosomal protein P1-alpha 3 OS=Schizosaccharomyces pombe GN=rpa3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14 Identity = 45/110 (40.91%), Postives = 58/110 (52.73%), Query Frame = -3 Query: 234 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 563 MSASELA +Y+ LIL D+GI IT+DK+ L KAANV +E W ++FAK LE ++L +L++N ESDEDMGF LFD Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLNIGSAAAAPAAGGAGAPAAAAGGEAAAEEQKEEAKEEEESDEDMGFGLFD 110
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_CAEEL (60S acidic ribosomal protein P1 OS=Caenorhabditis elegans GN=rla-1 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13 Identity = 46/109 (42.20%), Postives = 54/109 (49.54%), Query Frame = -3 Query: 234 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 560 S ELAC YA LIL DD +AIT +KIA L+KAANV E YWP LFAK LE ++ +LI + ESD+DMGF LFD Sbjct: 3 SNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPKEESDDDMGFGLFD 111
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_ASPFU (60S acidic ribosomal protein P1 OS=Aspergillus fumigatus GN=AFUA_1G06830 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13 Identity = 46/111 (41.44%), Postives = 55/111 (49.55%), Query Frame = -3 Query: 234 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVF-IESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 563 MS +ELAC+YA LIL DDG+ IT DKI L+ AA V +E W SLFAK LE +++ DL+ N ESDEDMGF LFD Sbjct: 1 MSTAELACSYAALILADDGVEITADKIQTLLGAAKVADVEPIWTSLFAKALEGKDIKDLLTNVGSGGAAAPAAVGGAAAGAAAPAEAAAAEEKKEEEKEESDEDMGFGLFD 111
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_SCHPO (60S acidic ribosomal protein P1-alpha 1 OS=Schizosaccharomyces pombe GN=rpa1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12 Identity = 45/110 (40.91%), Postives = 58/110 (52.73%), Query Frame = -3 Query: 234 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 563 MSASELA +Y+ LIL D+GI IT+DK+ L KAANV +E W ++FAK LE ++L +L++N ESDEDMGF LFD Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLN-IGSGAGAAPVAGGAAAPAAADGEAPAEEKEEAKEEEESDEDMGFGLFD 109
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA5_SCHPO (60S acidic ribosomal protein P1-alpha 5 OS=Schizosaccharomyces pombe GN=rpa5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = -3 Query: 234 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 563 MSASELA +YA LIL D+GI IT+DK+ L KA NV +E W ++FAK LE ++L +L++N ESDEDMGF LFD Sbjct: 1 MSASELATSYAALILADEGIEITSDKLLSLTKAGNVEVEPIWATIFAKALEGKDLKELLLN-IGSAGAASAPTAAGAGAAAPAEAAEEEKKEEAKEEEESDEDMGFGLFD 109 The following BLAST results are available for this feature:
BLAST of CB293550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293550 ID=CB293550; Name=CB293550; organism=Citrus sinensis; type=EST; length=631bpback to top |