CB293556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.358e-55 Identity = 108/191 (56.54%), Postives = 133/191 (69.63%), Query Frame = -2 Query: 257 FMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFKQ 829 F+RIA I L VS+LY+YAK+NSGPL+S V VE AVT VV PVYQKFK VP + S KFDEHAPP+AK+V +Q H LI A++KAQ V EA+TGGP+AA +YAA E K ++TNSVK W KLN Y H M D A+P AA +S +YN LV +MT GY + GYLPLVP+DDI KA+++ Sbjct: 18 FVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEK 208
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.145e-29 Identity = 77/205 (37.56%), Postives = 105/205 (51.22%), Query Frame = -2 Query: 260 FMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVH------YAAAESKHLLLTN---------SVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFK 829 F+++AAI +VC SSLY+YAK NSGPL+ V TVE V V+GPVY+KF VP + + + H P L KR + Q ++ + A + A + E Q G Y+ E L + +V AW LN LF +A + VPTAA WS+KYN V ++GY V YLPL+P + IAK F+ Sbjct: 25 FVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQ 229
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.254e-26 Identity = 77/208 (37.02%), Postives = 107/208 (51.44%), Query Frame = -2 Query: 257 FMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGG-----------------PRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFKQ 829 F++ AA++AL+ + +Y AK SGPL+ V +VE AV VVGPVY+K+ VP + + D PP+ K+V++Q S + A A+ L E + G P A YA E K +V AW KLN LF +A +AVPTAA S+KYN VV+ +KGY V Y+PLVP + I+K F + Sbjct: 27 FVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPK--AEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.377e-21 Identity = 65/177 (36.72%), Postives = 86/177 (48.59%), Query Frame = -2 Query: 263 LYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRK---FDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 784 LY YAK +GPL+ V TVE AV VV PVY +F VP A RK D H P K+V+SQ S++ E + G ++ + +V AW KLN LF +A+ +P AA ++KYN ++V +KGY V YLPLVP + IAK F Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKY-------ADRKVGELDRHVPSNVKKVSSQARSVVS-----------EVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVF 164
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.198e-20 Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = -2 Query: 263 FMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 829 F++ AA + LV ++ Y YAK+ +GPLR V VE V AVVGPVY +F GVP ++ ++ D PP LA+ A++V L+ TA+ A+ + A+ PRA Y E + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 40 FVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.198e-20 Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = -2 Query: 263 FMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 829 F++ AA + LV ++ Y YAK+ +GPLR V VE V AVVGPVY +F GVP ++ ++ D PP LA+ A++V L+ TA+ A+ + A+ PRA Y E + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 40 FVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.584e-19 Identity = 61/189 (32.28%), Postives = 92/189 (48.68%), Query Frame = -2 Query: 263 FMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 829 F+R A + A+ S+LY YAK SGPL+ V T+E+ V VV PVY +P + D PP+ K+V++Q +S+ + A + + G + A + +V W LN L +A++ VPTA +S+KYN +V T++GY V YLPL+P + I K F Sbjct: 15 FVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVF 199
BLAST of CB293556 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.240e-17 Identity = 60/199 (30.15%), Postives = 94/199 (47.24%), Query Frame = -2 Query: 257 FMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXDASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPR--------AAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFKQ 829 F+++AA+ C S+LY+ AK N+GPL+ V +E V V+ P+Y+KF VP D + + P L K+ +SQ + A++ + V++ R AA +YAA W LN LF +A + +PTA WS+KYN V + + Y YLP++PI+ I+ +Q Sbjct: 46 FIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQA---LTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAAT------------LWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQ 229 The following BLAST results are available for this feature:
BLAST of CB293556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293556 ID=CB293556; Name=CB293556; organism=Citrus sinensis; type=EST; length=830bpback to top |