CB293586

Overview
NameCB293586
Unique NameCB293586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2871 contig Csv1_Contig2871:418..1199. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 4.015e-92
Identity = 162/197 (82.23%), Postives = 178/197 (90.36%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRHLEENLK TVK TVS VAKK LT+GA+GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPLMQK+RQVLVEHALNNGE+EK  ++SIFQKI AFEEELK VLPKEVE+AR  VE+G+P+IPNRIKECRSYPLY+ VREELG   LTGEKV SPGE+FDKVFTAMC+GKIIDP+L+CL  WNGA
Sbjct:  215 YLVALCQAIDLRHLEENLKSTVKKTVSHVAKKTLTIGANGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKVRQVLVEHALNNGESEKNGSTSIFQKIGAFEEELKAVLPKEVESARDGVESGNPSIPNRIKECRSYPLYKFVREELGTGLLTGEKVRSPGEDFDKVFTAMCEGKIIDPLLDCLSAWNGA 411
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 8.371e-90
Identity = 156/197 (79.19%), Postives = 178/197 (90.36%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLV LCQA+DLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSR CEKDLLK  D+EHVFAYIDDPCSATYPLMQKLRQVLVEHAL NGE E  + +SIFQKI +FEEELKT+LPKEVE+AR  VENG+P +PNRIKECRSYPLY+ VREELG + LTGEKV SPGE+FDKVFTA+C GK++DP+LECL+EWNGA
Sbjct:  481 FLVGLCQAVDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRLCEKDLLKLVDKEHVFAYIDDPCSATYPLMQKLRQVLVEHALVNGERETNSTTSIFQKIRSFEEELKTLLPKEVESARLEVENGNPVVPNRIKECRSYPLYKFVREELGTSLLTGEKVKSPGEDFDKVFTAICAGKLMDPLLECLKEWNGA 677
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.428e-89
Identity = 156/197 (79.19%), Postives = 181/197 (91.88%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVALCQAIDLRHLEENLK+TVKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAYIDDPCSA+ PLMQKLRQVLV+HAL+NG+ EK + +SIFQKI AFE+ELKT+LPKEVE AR  +E+G+  IPNRIKECRSYPLY++VRE++G + LTGEKV SPGEEFDKVFTAMC+GK+IDPMLECL+EWNGA
Sbjct:  519 FLVALCQAIDLRHLEENLKNTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVVDREYVFAYIDDPCSASSPLMQKLRQVLVDHALDNGDREKNSTTSIFQKIGAFEDELKTLLPKEVEIARTELESGNAAIPNRIKECRSYPLYKIVREDIGTSLLTGEKVRSPGEEFDKVFTAMCEGKLIDPMLECLKEWNGA 715
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.181e-89
Identity = 157/197 (79.70%), Postives = 176/197 (89.34%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLV LCQA+DLRHLEENLK TVKNTVSQVAKKVLT+G +GELHPSRFCE DLL+  DRE++FAYIDDPCSATYPLMQKLRQVLVEHAL NGE EK  ++SIFQKIAAFE+ELK +LPKEVE+AR  VE+G+P IPNRIKECRSYPLY+ +REELG  +LTGEKVTSPGEEFDKVFTAM +G+IIDP+L CL  WNGA
Sbjct:  507 FLVGLCQAVDLRHLEENLKSTVKNTVSQVAKKVLTMGVNGELHPSRFCELDLLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGETEKNLSTSIFQKIAAFEDELKALLPKEVESARAVVESGNPAIPNRIKECRSYPLYKFIREELGTVYLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESWNGA 703
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.155e-89
Identity = 158/197 (80.20%), Postives = 175/197 (88.83%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G +GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPL QKLRQVLV+HAL NGE+EK  N+SIFQKIA FEEELKT+LPKEVE+AR   E+G+PTIPN+I  CRSYPLY+ VREELG   LTGE V SPGEE DK+F+AMCQGKIIDP+LECL EWNGA
Sbjct:  524 FLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTMGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNFNTSIFQKIATFEEELKTLLPKEVESARTAYESGNPTIPNKINGCRSYPLYKFVREELGTGLLTGENVISPGEECDKLFSAMCQGKIIDPLLECLGEWNGA 720
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.426e-89
Identity = 158/197 (80.20%), Postives = 171/197 (86.80%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +L+ALCQAIDLRHLEENLK+TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+ FAYIDDPCSATYPLMQKLRQVLVEHAL N ENEK  N+SIFQKI  FEEELKT+LPKEVE AR   ENG   IPN+IKECRSYPLY+ VREELG   LTGEKV SPGEE DK+FTAMCQGKIIDP+LEC+ EWNGA
Sbjct:  514 YLIALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKIVDREYCFAYIDDPCSATYPLMQKLRQVLVEHALANAENEKNVNTSIFQKITTFEEELKTLLPKEVEGARIAYENGQSAIPNKIKECRSYPLYKFVREELGTEMLTGEKVRSPGEECDKLFTAMCQGKIIDPLLECIGEWNGA 710
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.087e-89
Identity = 158/197 (80.20%), Postives = 175/197 (88.83%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLV LCQAIDLRHLEENLK TVKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  D EH+FAYIDDPCS TYPLMQKLRQVLVEHAL NGE EK +++SIFQKI AFEEELKT LPKEVE+AR  +E G+  IPNRIKECRSYPLY+ VREEL  + LTGEKV SPGEEFDKVF+A+CQGK+IDP+LECLREWNGA
Sbjct:  419 FLVGLCQAIDLRHLEENLKSTVKNTVSQVAKRVLTIGVNGELHPSRFCEKDLIKVVDGEHLFAYIDDPCSCTYPLMQKLRQVLVEHALINGEKEKDSSTSIFQKIGAFEEELKTHLPKEVESARIELERGNSAIPNRIKECRSYPLYKFVREELKTSLLTGEKVRSPGEEFDKVFSAICQGKVIDPLLECLREWNGA 615
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 9.255e-89
Identity = 157/197 (79.70%), Postives = 176/197 (89.34%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G SGELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPL QKLRQVLV+HAL NGE+EK +N+SIFQKIA FEEELKT+LPKEVE+AR   ENG+ TI N+I  CRSYPLY+ VREELG + LTGE+V SPGEE DK+FTAMCQGKIIDP+L+CL EWNGA
Sbjct:  524 FLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTIGVSGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLAQKLRQVLVDHALVNGESEKNSNTSIFQKIATFEEELKTLLPKEVESARTAYENGNSTIANKINGCRSYPLYKFVREELGTSLLTGERVISPGEECDKLFTAMCQGKIIDPLLKCLGEWNGA 720
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 9.255e-89
Identity = 151/197 (76.65%), Postives = 179/197 (90.86%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQA+DLRH EENL++TVK+TVSQVAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQVLVEHAL NGE+EK  ++SIFQKI AFEEE+KT+LPKEVE+ R  +ENG+  IPNRIKECRSYPLY+ VREELG   LTGEKV SPGEEFDKVFTA+C+G++IDP+++CL+EWNGA
Sbjct:  513 YLVALCQAVDLRHFEENLRNTVKSTVSQVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGESEKNLSTSIFQKIRAFEEEIKTLLPKEVESTRAAIENGNSAIPNRIKECRSYPLYKFVREELGTELLTGEKVRSPGEEFDKVFTALCKGEMIDPLMDCLKEWNGA 709
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 326.635 bits (836), Expect = 9.255e-89
Identity = 157/197 (79.70%), Postives = 172/197 (87.31%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVA+CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE V+ Y DDPCSATYPL+QKLRQV+V+HAL NGE+EK A +SIF KI AFEEELK VLPKEVE AR   +NG+  IPNRIKECRSYPLYR VREELG   LTGEKVTSPGEEFDKVFTA+C+GKIIDPM+ECL EWNGA
Sbjct:  524 FLVAICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYPLIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGA 720
The following BLAST results are available for this feature:
BLAST of CB293586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PALY_VITVI4.015e-9282.23Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]
PAL1_POPKI8.371e-9079.19Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PALY_CITLI1.428e-8979.19Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL1_DAUCA3.181e-8979.70Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_MEDSA4.155e-8980.20Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PALY_STYHU5.426e-8980.20Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PALY_PERAE7.087e-8980.20Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PALY_TRISU9.255e-8979.70Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PALY_CAMSI9.255e-8976.65Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL1_ARATH9.255e-8979.70Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bd07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bd07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293586 ID=CB293586; Name=CB293586; organism=Citrus sinensis; type=EST; length=782bp
TTTTTTTTTTTTTTATAAAGGACAATAAGTCTTATAACCTTATATGAAAA
AACCAATAGAAGTGATTGAAATATTACAGATGAATTTGTACCACTGACTC
GCATGGGCAAATTCTATGAACACAAGAACACAAGGGATTGAAGACCGTGT
TATTAAACAAAATAAAAACAACTAACAAATTGGAAGAGGGGCGCCATTCC
ATTCCCTGAGACATTCCAGCATTGGATCAATGATCTTGCCCTGGCACATT
GCTGTAAACACTTTGTCAAATTCCTCGCCGGGCGATGTAACTTTTTCCCC
TGTTAGAAAATTAAACCCGAGCTCCTCCCTCACTAACCTGTACAAAGGGT
AAGACCTGCATTCTTTGATCCTGTTGGGAATTGTTGGACTTCCATTCTCA
ACAGTCTGCCTGGCGTTCTCAACTTCTTTGGGCAAAACGGTTTTCAATTC
CTCCTCAAAGGCTGCAATCTTCTGGAAGATTGAAGAGTTGGCAGTCTTCT
CGTTCTCTCCATTGTTCAGTGCGTGCTCAACAAGTACTTGCCTTAGCTTT
TGCATCAATGGATAGGTAGCACTGCAGGGGTCATCAATGTATGCAAAGAC
GTGTTCGCGATCAGCCGCTTTGAGCAGATCCTTCTCACAGAATCTTGATG
GATGAAGCTCTCCACTAGCACCGACGGTTAAGACTTTCTTAGCTACTTGG
CTGACAGTATTCTTGACTGTATGCTTCAAATTCTCCTCCAAATGTCTCAA
ATCAATAGCCTGGCAAAGCGCTACCAAGAATG
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