CB293700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293700 vs. ExPASy Swiss-Prot
Match: VAL2_ARATH (B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.117e-54 Identity = 122/225 (54.22%), Postives = 148/225 (65.78%), Query Frame = 1 Query: 148 LGNSSESVGLRHLLQFRNDDLNGSFRKVKP*EA---AKSDISKANIGAKDIYGPLAHTNLSITLGSPGINSNSFPSAVVDEKEHSKTSAIIHQGPKSRHXXXXXXXXXXXTGSEANAG--ISQIRVARPPAEGRGRNQLLPRYWPRITDQELQQLSGD----SNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFW 795 +G+ E L+HLL F+ D S ++K E+ + D + K++ A NLSI+LG P + ++ F A VD++ SKT++I P+SR +G +SQI VARPP EGRG+ QLLPRYWPRITDQEL QLSG SNS I+PLFEKVLSASDAGRIGRLVLPKACAEAYFPPIS PEGLPL+IQD+KGKEWVFQFRFW Sbjct: 122 VGSVLERTNLKHLLHFQRIDPTHSSLQMKQEESLLPSSLDALRHKTERKELS---AQPNLSISLG-PTLMTSPFHDAAVDDR--SKTNSIFQLAPRSRQLLPKPANSAPIAAGMEPSGSLVSQIHVARPPPEGRGKTQLLPRYWPRITDQELLQLSGQYPHLSNSKIIPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQDIKGKEWVFQFRFW 340
BLAST of CB293700 vs. ExPASy Swiss-Prot
Match: Y7797_ORYSJ (B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.054e-50 Identity = 92/101 (91.09%), Postives = 95/101 (94.06%), Query Frame = 1 Query: 493 ISQIRVARPPAEGRGRNQLLPRYWPRITDQELQQLSGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFW 795 + +RVARPPAEGRGRNQLLPRYWPRITDQELQQ+SGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEG PL IQD KGKEW FQFRFW Sbjct: 317 LPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDAKGKEWHFQFRFW 417 HSP 2 Score: 25.0238 bits (53), Expect = 3.054e-50 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 779 FNSDFGPNNNTRMYV 823 F F PNNN+RMYV Sbjct: 412 FQFRFWPNNNSRMYV 426
BLAST of CB293700 vs. ExPASy Swiss-Prot
Match: VAL1_ARATH (B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.308e-42 Identity = 76/100 (76.00%), Postives = 88/100 (88.00%), Query Frame = 1 Query: 496 SQIRVARPPAEGRGRNQLLPRYWPRITDQELQQLSGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFW 795 +Q R+ RPP EGRGR LLPRYWP+ TD+E+QQ+SG+ N IVPLFEK LSASDAGRIGRLVLPKACAEAYFPPISQ EG+PL+IQDV+G+EW FQFR+W Sbjct: 250 AQARIGRPPVEGRGRGHLLPRYWPKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYW 349
BLAST of CB293700 vs. ExPASy Swiss-Prot
Match: Y7633_ORYSJ (B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 7.880e-41 Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = 1 Query: 496 SQIRVARPPAEGRGRNQLLPRYWPRITDQELQQLSGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFW 795 +Q+R RP + + R+QLLPRYWPRITDQELQ LSGDSNS I PLFEK+LSASDAGRIGRLVLPK CAEAYFP ISQ EGLPL++QD GKEWVFQFRFW Sbjct: 408 AQLRNGRPRMDAKARSQLLPRYWPRITDQELQHLSGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPAISQAEGLPLKVQDATGKEWVFQFRFW 507
BLAST of CB293700 vs. ExPASy Swiss-Prot
Match: VAL3_ARATH (B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana GN=VAL3 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.146e-15 Identity = 44/96 (45.83%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 526 EGRGRNQLLPRYWPRIT--DQELQQLSGDSNSTIVPLFE----KVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFW 795 E G+ Q++PR+WP+++ +Q LQ S + S+++ K+LSA+D G+ RLVLPK AEA+ P +S +G+PL +QD GKEW FQFRFW Sbjct: 262 ETPGKYQVVPRFWPKVSYKNQVLQNQSKEYPSSLIDTTLEYNFKILSATDTGK--RLVLPKKYAEAFLPQLSHTKGVPLTVQDPMGKEWRFQFRFW 355 The following BLAST results are available for this feature:
BLAST of CB293700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293700 ID=CB293700; Name=CB293700; organism=Citrus sinensis; type=EST; length=824bpback to top |