CB293716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293716 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20 Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = -1 Query: 180 NNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFVLCVAGNDLIKAPEMEYYEAMKKAGKDVELLVNPGMGHSFYL 641 ++WL D + R+FL GDSSGGN+VH VA RA + S + V G I ++P F ER++SE +T+ D + LP D+ HP P GP + ++GL P ++ VAG DLI+ +++Y E +KKAG++V+LL FYL Sbjct: 170 SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYL 321
BLAST of CB293716 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = -1 Query: 180 NWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFVLCVAGNDLIKAPEMEYYEAMKKAGKDVELLVNPGMGHSFYL 638 +WL D + +FL GDSSGGN+ H VA RAG++ + V G I ++P F ER++SE +T+ D + LP D+ HP P P ++G+ P ++ VAG DLI+ ++ Y E +KKAG++V+L+ FYL Sbjct: 173 SWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID---VLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYL 323
BLAST of CB293716 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = -1 Query: 213 NWLTEHVDFQR-------VFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFVLCVAGNDLIKAPEMEYYEAMKKAGKDVELL 638 NW+ V Q V+L GDSSGGN+ H VA RA + + +V G I +HP F QER++SE +T+ D + LP D+ HP P GP + G+ P ++ VAG DL++ ++ Y + +KK G +V LL Sbjct: 167 NWVKSRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGV---KVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLL 312
BLAST of CB293716 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = -1 Query: 180 RVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFVLCVAGNDLIKAPEMEYYEAMKKAGKDVELLVNPGMGHSFYL 608 RVFL GDSSGGN+ H VA RA D + +V G I ++ F ER++SE +TL D + LP ++D+ HP P GP + GL ++ V+G DL ++ Y +A+++ G V+++ FYL Sbjct: 191 RVFLSGDSSGGNIAHHVAVRAADEGV---KVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYL 330 The following BLAST results are available for this feature:
BLAST of CB293716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293716 ID=CB293716; Name=CB293716; organism=Citrus sinensis; type=EST; length=680bpback to top |