CB293717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.565e-24 Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 2 Query: 122 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNG-DDCKNK---KKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVVGAIPIHPGFLRQERSKSE 691 +FL VP +++ ++ V + DV I++++ L R+Y P + D +N + +P+I+ FHGG F S A+ +Y + +L A+ VSV RRAPE+R P A+DDG+ L W+ S ++WL D + R+FL GDSSGGN+VH VA RA + S + V+G I ++P F ER++SE Sbjct: 47 EFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS----------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESE 228
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.401e-22 Identity = 70/197 (35.53%), Postives = 104/197 (52.79%), Query Frame = 2 Query: 122 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVVGAIPIHPGFLRQERSKSE 691 ++L V +++ +D V + DV I++ L R+Y P + + +K +P+IL FHGG F S A+ +Y + +L + VSV RRAPE+ P A+DDG+ AL W+ S S WL D + +FL GDSSGGN+ H VA RAG+ S + V+G I ++P F ER++SE Sbjct: 47 EYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS----------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESE 230
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.095e-22 Identity = 73/211 (34.60%), Postives = 106/211 (50.24%), Query Frame = 2 Query: 80 DGSVDRTWTGPPEVKFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK-------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVVGAIPIHPGFLRQERSKSE 691 DGS +R +FL VP +S +D V + D ++ + L RIY P + K +P+++ FHGG F S A+ +Y +L + VSV RR+PEHR P A+DDG+ AL W++S Q+ N + V+L GDSSGGN+ H VA RA + ++V+G I +HP F QER++SE Sbjct: 38 DGSFNRDLA-----EFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVY---------VYLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHPMFGGQERTQSE 230
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.913e-21 Identity = 70/207 (33.82%), Postives = 99/207 (47.83%), Query Frame = 2 Query: 122 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGD-----------------DCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVVGAIPIHPGFLRQERSKSE 691 ++L VP ++ ++ V++ D I++ GL VRIY GD D + P+I+ FHGG F S A +Y + + K + VSV RRAPEHR P A+DDG+ AL W+ S ++ RVFL GDSSGGN+ H VA RA D ++V G I ++ F ER++SE Sbjct: 47 EYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAA----EGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQ---------ARVFLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFGGTERTESE 237
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11 Identity = 61/205 (29.76%), Postives = 96/205 (46.83%), Query Frame = 2 Query: 119 VKFLS--EPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR-AGDADLSPLRVVGAIPIHPGFLRQERS-KSELENPQSPLLT 721 VKFL+ + VPP SD ++V + T N + VR+Y P+ K+K + + HGGG+CV A Y + + A + + VS R APE+ P F+D ++AL W + + VD +RV + GDS+GGN+ VA + D D+ +++ I+P + S EN Q P+L+ Sbjct: 61 VKFLTSFQEVPPTSD--ENVTVTETTFNN---VPVRVYVPKR---------KSKTLRRGLFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLRQDVLEKYG---------VDPERVGVSGDSAGGNLAAAVAQQLIKDPDVK-IKLKTQSLIYPALQTLDMDLPSYRENAQFPILS 241
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: AAAD_RAT (Arylacetamide deacetylase OS=Rattus norvegicus GN=Aadac PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11 Identity = 59/205 (28.78%), Postives = 95/205 (46.34%), Query Frame = 2 Query: 140 VPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR-AGDADLSPLRVVGAIPIHPGFLRQERS-KSELENPQSPLLTLDMVDKFLS 748 VPP SD ++V + N + VRIY P+ K+ + HGGG+C+ A ++MY + + A + A+ VS AP++ P F+D + +L W + + VD +RV + GDS+GGN+ V + D D+ V A+ I+P + + S+ EN Q PLLT ++ +F S Sbjct: 70 VPPTSD--ENVTVMETDFNS---VPVRIYIPKR---------KSTTLRRGLFFIHGGGWCLGSAAYFMYDTLSRRTAHRLDAVVVSTDYGLAPKYHFPKQFEDVYHSLRWFLQEDILEKYG---------VDPRRVGVSGDSAGGNLTAAVTQQILQDPDVKIKLKVQAL-IYPALQALDMNVPSQQENSQYPLLTRSLLIRFWS 250
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: AAAD_BOVIN (Arylacetamide deacetylase OS=Bos taurus GN=AADAC PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11 Identity = 55/203 (27.09%), Postives = 91/203 (44.83%), Query Frame = 2 Query: 143 PPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVVGAIPIHPGFLRQERS-KSELENPQSPLLTLDMVDKFLS 748 PP SD +++ D T N + VRIY P++ K K + + HGGG+C D+Y Y + A+ + A+ +S R AP++ P F+D + AL W N + VD R+ + GDS+GGN+ VA + + +++ I+P + S EN P+L+ ++ +F S Sbjct: 72 PPTSD--ENIIVKDTTFND---IPVRIYVPQQ---------KTKSLRRGLFYIHGGGWCFGSNDYYSYDLLSRWTAERLDAVVISTNYRLAPKYHFPVQFEDVYTALKWFLD---------PQNLESYGVDPGRIGISGDSAGGNLAAAVAQQLLEDPDVKIKLKVQTLIYPALQNFDFDLPSYRENAHYPVLSKSLMVRFWS 251
BLAST of CB293717 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11 Identity = 53/203 (26.11%), Postives = 96/203 (47.29%), Query Frame = 2 Query: 155 DFIDSVATHDVTINKES--GLRVRIYSPEEIKKLNGDDCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEH-VDFQRVFLIGDSSGGNVVHEVAARA-GDADLSPLRVVGAIPIHPGF-LRQERSKSELENPQSPLLTLDMVDKFLS 748 D+ ++ +T+ + + VR+Y P+ K++ + +++FHGGGFC + + + A ++ A+ V V R AP+H PA F+DG A+ + + LT++ VD R+ + GDSSGGN+ V + DA++ ++ + ++PG + S EN +LT D+ K +S Sbjct: 69 DYTQPLSDEYITVTDTTFVDIPVRLYLPKR---------KSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFFLLEKI----------LTKYGVDPTRICIAGDSSGGNLATAVTQQVQNDAEIKH-KIKMQVLLYPGLQITDSYLPSHRENEHGIVLTRDVAIKLVS 251 The following BLAST results are available for this feature:
BLAST of CB293717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293717 ID=CB293717; Name=CB293717; organism=Citrus sinensis; type=EST; length=749bpback to top |