CB293747

Overview
NameCB293747
Unique NameCB293747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7188 contig Csv1_Contig7188:1..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: APR1_ARATH (5'-adenylylsulfate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=APR1 PE=1 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 3.331e-90
Identity = 169/206 (82.04%), Postives = 185/206 (89.81%), Query Frame = 1
Query:  124 KVSQIGSFRLVDRAHVASTSLS---QRRSLVRPLNAEPKRNDSVVPLAATLATPEVAEKVEGEE--DFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSP 726
            KVSQIGS RL+DR HVA  SL+   +R S V+PLNAEPK  DS++PLAAT+   E+AE+VE  E  DFE+ AK+LENASPLEIMD+ALEK+GNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFD VEKH+GIRIEYMFPD+VEVQ LVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGL+AWITGQRKDQSP
Sbjct:   27 KVSQIGSLRLLDRVHVAPVSLNLSGKRSSSVKPLNAEPKTKDSMIPLAATMVA-EIAEEVEVVEIEDFEELAKKLENASPLEIMDKALEKYGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDAVEKHYGIRIEYMFPDSVEVQGLVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLKAWITGQRKDQSP 231          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: APR3_ARATH (5'-adenylylsulfate reductase 3, chloroplastic OS=Arabidopsis thaliana GN=APR3 PE=2 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 2.556e-82
Identity = 161/230 (70.00%), Postives = 182/230 (79.13%), Query Frame = 1
Query:   49 MALAVTXXXXXXXXXXXXXXXXNDIKVSQIGSFRLVDRAHV--ASTSLSQRRSLVRPLNAEPKRNDSVVPLAATLATPEVAEKVE--GEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSP 726
            MALA+                 +D+KV++IGS RL++R +V  AS SLS +RS V+ LN +    +S+V         EV EK++    EDFE+ AK LENASPLEIMD+ALEKFGNDIAIAFSGAEDVALIEYAHLTGRP+RVFSLDTGRLNPETYR FD VEKH+GIRIEYMFPDAVEVQALVR+KGLFSFYEDGHQECCR+RKVRPLRRALKGLRAWITGQRKDQSP
Sbjct:    1 MALAINVSSSSSSAISSSSFPSSDLKVTKIGSLRLLNRTNVSAASLSLSGKRSSVKALNVQSITKESIV-------ASEVTEKLDVVEVEDFEELAKRLENASPLEIMDKALEKFGNDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFDTVEKHYGIRIEYMFPDAVEVQALVRNKGLFSFYEDGHQECCRIRKVRPLRRALKGLRAWITGQRKDQSP 223          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: APR2_ARATH (5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=APR2 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 3.125e-80
Identity = 156/205 (76.10%), Postives = 172/205 (83.90%), Query Frame = 1
Query:  115 NDIKVSQIGSFRLVDRAHVASTSLSQRRSLVRPLNAEP-KRNDSVVPLAATLATPEVAEKVEGEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSP 726
            ++ K  QI S RL DR H     LSQRR  ++PLNAE   R++S V  A+TL  PEV EK    EDFEQ AK+LE+ASPLEIMD+ALE+FG+ IAIAFSGAEDVALIEYA LTG+PFRVFSLDTGRLNPETYR FD VEK +GIRIEYMFPDAVEVQALVR+KGLFSFYEDGHQECCRVRKVRPLRRALKGL+AWITGQRKDQSP
Sbjct:   24 SESKALQICSIRLSDRTH-----LSQRRYSMKPLNAESHSRSESWVTRASTLIAPEVEEKGGEVEDFEQLAKKLEDASPLEIMDKALERFGDQIAIAFSGAEDVALIEYARLTGKPFRVFSLDTGRLNPETYRLFDAVEKQYGIRIEYMFPDAVEVQALVRNKGLFSFYEDGHQECCRVRKVRPLRRALKGLKAWITGQRKDQSP 223          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: CYSH_PSEAE (Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa GN=cysH PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 77/140 (55.00%), Postives = 101/140 (72.14%), Query Frame = 1
Query:  307 DFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSP 726
            D    A  L + SP +I+  A E FG+++ I+FSGAEDV L++ A    R  +VFSLDTGRL+PETYRF D+V +H+GI I+ + PD   ++ LV+ KGLFSFY DGH ECC +RK+ PL+R L G+RAW TGQR+DQSP
Sbjct:   29 DLPALASSLADKSPQDILKAAFEHFGDELWISFSGAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSP 168          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: CYSH_PSEAB (Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=cysH PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 77/140 (55.00%), Postives = 101/140 (72.14%), Query Frame = 1
Query:  307 DFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSP 726
            D    A  L + SP +I+  A E FG+++ I+FSGAEDV L++ A    R  +VFSLDTGRL+PETYRF D+V +H+GI I+ + PD   ++ LV+ KGLFSFY DGH ECC +RK+ PL+R L G+RAW TGQR+DQSP
Sbjct:   29 DLPALASSLADKSPQDILKAAFEHFGDELWISFSGAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSP 168          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: CYSH_PSEA8 (Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain LESB58) GN=cysH PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 77/140 (55.00%), Postives = 101/140 (72.14%), Query Frame = 1
Query:  307 DFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSP 726
            D    A  L + SP +I+  A E FG+++ I+FSGAEDV L++ A    R  +VFSLDTGRL+PETYRF D+V +H+GI I+ + PD   ++ LV+ KGLFSFY DGH ECC +RK+ PL+R L G+RAW TGQR+DQSP
Sbjct:   29 DLPALASSLADKSPQDILKAAFEHFGDELWISFSGAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSP 168          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: CYSH_NEIMB (Phosphoadenosine phosphosulfate reductase OS=Neisseria meningitidis serogroup B GN=cysH1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1
Query:  412 AEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLRAWITGQRKDQS 723
            AED+ + +          +F+LDTG L+ ET    D + + +  +RI+   P   +    V SKG F+FY+  +  +ECCR+RK  PL RA+ G  AW+TGQR++QS
Sbjct:   53 AEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLDRLGRAYPHLRIKRFRPVREDADRYVESKGRFAFYDSVEARRECCRIRKTEPLNRAIAGADAWLTGQRREQS 159          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: CYSH_NEIMA (Phosphoadenosine phosphosulfate reductase OS=Neisseria meningitidis serogroup A GN=cysH PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  412 AEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLRAWITGQRKDQS 723
            AED+ + +          +F+LDTG L+ ET    D +E+ +  ++I+   P   +    V SKG F+FY+  +  +ECCR+RK  PL RA+ G  AW+TGQR++QS
Sbjct:   51 AEDMVITDLIAGENLNIGIFTLDTGLLHAETLNLLDRIERVYPHMQIKRFQPIREDALHYVESKGRFAFYDSVEARRECCRIRKTEPLDRAIAGADAWLTGQRREQS 157          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: CYSH_RHITR (Phosphoadenosine phosphosulfate reductase (Fragment) OS=Rhizobium tropici GN=cysH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 38/85 (44.71%), Postives = 48/85 (56.47%), Query Frame = 1
Query:  475 LDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLRAWITGQRKDQS 723
            L TGRL PET +  DE E  + IRI    P+  ++ A     GL  FYE  +    CC VRK++PL RAL G   W+TG R+ QS
Sbjct:    1 LQTGRLFPETLKLIDETENQYDIRISRYEPEQADIDAYAEKYGLNGFYESVEARHACCGVRKLKPLARALSGATIWVTGLRRGQS 85          
BLAST of CB293747 vs. ExPASy Swiss-Prot
Match: CYSH_STAHJ (Phosphoadenosine phosphosulfate reductase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cysH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 1
Query:  286 EKVEGEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFS-GAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSP 726
            E  EG+   +  + +       EI++ A   +G+ I  + S GAE + LI+  +      ++  LDT     ETY   D V++HF  +RIE   PD  +E QA   +  L   +++   +CC +RK++PL   L G  AW++G R+DQSP
Sbjct:    9 ENFEGDPFIDSISTDDATKGAYEILEWAYRTYGDSIVYSCSFGAESMVLIDLIYQIKPDAQIVFLDTDLHFQETYDLIDRVKEHFPKLRIEMKKPDLTLEEQADKYNPAL---WKNNPNQCCYIRKIKPLEEVLGGAVAWVSGLRRDQSP 155          
The following BLAST results are available for this feature:
BLAST of CB293747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
APR1_ARATH3.331e-9082.045'-adenylylsulfate reductase 1, chloroplastic OS=A... [more]
APR3_ARATH2.556e-8270.005'-adenylylsulfate reductase 3, chloroplastic OS=A... [more]
APR2_ARATH3.125e-8076.105'-adenylylsulfate reductase 2, chloroplastic OS=A... [more]
CYSH_PSEAE1.853e-4055.00Phosphoadenosine phosphosulfate reductase OS=Pseud... [more]
CYSH_PSEAB1.853e-4055.00Phosphoadenosine phosphosulfate reductase OS=Pseud... [more]
CYSH_PSEA81.853e-4055.00Phosphoadenosine phosphosulfate reductase OS=Pseud... [more]
CYSH_NEIMB2.980e-1438.32Phosphoadenosine phosphosulfate reductase OS=Neiss... [more]
CYSH_NEIMA5.083e-1438.32Phosphoadenosine phosphosulfate reductase OS=Neiss... [more]
CYSH_RHITR1.132e-1344.71Phosphoadenosine phosphosulfate reductase (Fragmen... [more]
CYSH_STAHJ1.931e-1332.67Phosphoadenosine phosphosulfate reductase OS=Staph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06cd11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cd11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293747 ID=CB293747; Name=CB293747; organism=Citrus sinensis; type=EST; length=727bp
GCCCTAGGCAAACACAAACACAAACACAAACACAAAATTTCAATAATCAT
GGCCCTGGCTGTAACTTCTTCAAATTCGATATCAAGCTCCAGTTTTGCTC
TTACTAGTTCTTCAAATGACATTAAAGTTTCACAAATCGGTTCTTTCCGG
TTAGTGGACCGGGCACACGTGGCTTCCACGAGCCTCTCTCAACGACGTAG
TTTAGTAAGACCGTTGAATGCCGAGCCAAAACGAAACGATTCCGTGGTGC
CTCTGGCAGCAACTCTCGCTACCCCTGAAGTGGCGGAGAAAGTAGAAGGG
GAGGAGGATTTTGAGCAATTTGCTAAGGAGCTTGAAAATGCGTCACCTCT
TGAAATCATGGATAGAGCTCTTGAAAAGTTTGGAAATGACATAGCGATTG
CTTTCAGTGGTGCTGAAGATGTTGCTTTGATCGAGTATGCCCATTTAACT
GGTAGACCATTTAGGGTGTTTAGCCTGGATACTGGAAGGCTAAACCCAGA
AACATATAGATTCTTTGACGAAGTTGAGAAACATTTTGGCATACGTATTG
AATACATGTTTCCCGATGCTGTTGAAGTTCAGGCATTAGTGAGGAGCAAG
GGGCTCTTCTCTTTCTATGAGGATGGGCACCAGGAGTGCTGCCGTGTGAG
GAAAGTGAGGCCCCTTCGGAGGGCCCTCAAGGGATTGCGTGCCTGGATCA
CTGGCCAAAGGAAAGATCAGTCTCCAG
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