CB293761

Overview
NameCB293761
Unique NameCB293761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig328 contig Csv1_Contig328:1..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 9.249e-116
Identity = 190/263 (72.24%), Postives = 214/263 (81.37%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGC 799
            +DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQELVDCDTSYNEGCNGGLMDYAFEFII NGGIDT++DYPYK +DG+CD  RKNAKVVTID YEDVP   E++L+KAVA+QP+S+AIE GG AFQLY+SGIF G CGT LDHGV AVGYGTENG DYWIV+NSWG SWGE+GY+RM RN+A + +GKCGIA+E SY                        CD+YY+CPESNTCCC+FEYG  CFAWGC
Sbjct:  141 IDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGC 402          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 415.616 bits (1067), Expect = 1.578e-115
Identity = 192/263 (73.00%), Postives = 212/263 (80.61%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGC 799
            VDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQELVDCDTSYNEGCNGGLMDYAF+FII+NGGIDTE+DYPYK  D  CD  RKNAKVVTID YEDV  N E +LQKAVANQPVSVAIE GG AFQLY SGIFTG+CGT+LDHGV AVGYGTENG DYWIV+NSWG SWGE+GY+RMERN+  + +GKCGIA+E SY                       VCDNYY+CP+S TCCC++EYG  C+AWGC
Sbjct:  133 VDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKAS-SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGC 394          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 368.237 bits (944), Expect = 2.889e-101
Identity = 174/270 (64.44%), Postives = 203/270 (75.19%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXA------VCDNYYSCPESNTCCCVFEYGNSCFAWGC 799
            VDWR+KGAVA VK+QG CGSCWAFS ++ VE IN++VTG +I+LSEQELV+C T+  N GCNGGLMD AF+FII NGGIDTE+DYPYKA+DG CD  R+NAKVV+ID +EDVP NDEK+LQKAVA+QPVSVAIE GG  FQLY SG+F+GRCGTSLDHGV AVGYGT+NG DYWIV+NSWG  WGE+GY+RMERN+  T TGKCGIAM ASY                             VCD+ +SCP  +TCCC F + N C  WGC
Sbjct:  145 VDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVT-TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGC 413          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.098e-100
Identity = 167/263 (63.50%), Postives = 200/263 (76.05%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGC 799
            +DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAFEF+I NGGIDTEEDYPYK  +G CD YRKNAKVV ID YEDVP+N+EKALQKAVA+QPVS+A+E GG  FQ Y+SGIFTG+CGT++DHGV   GYGTENG DYWIV+NSWG++  E GY+R++RNV+ + +G CG+A+E SY                        CD Y  C    TCCC+ ++  SCF+WGC
Sbjct:   22 IDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSS-SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGC 283          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 341.658 bits (875), Expect = 2.895e-93
Identity = 155/211 (73.46%), Postives = 182/211 (86.26%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYPY+   G C+++ KN++VV+ID YEDVP  DE AL+KA++ QPVSVAIE GG  FQ Y+SGIFTG CGT+LDH V AVGYG+ENG DYWIV+NSWG  WGE GYIRMERN+A + +GKCGIA+EASY
Sbjct:  149 VDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASY 359          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.201e-92
Identity = 156/213 (73.24%), Postives = 185/213 (86.85%), Query Frame = 2
Query:    5 VGVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            V VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG L+SLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYPY   +G C++  KN++VVTID YEDVP  DE AL++AV+ QPVSVAI+ GG AFQ Y+SGIFTG+CGT++DH V AVGYG+ENG DYWIV+NSWG+ WGE GYIRMERNVA + +GKCGIA+EASY
Sbjct:  102 VTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVA-SKSGKCGIAIEASY 313          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 337.035 bits (863), Expect = 7.131e-92
Identity = 167/267 (62.55%), Postives = 190/267 (71.16%), Query Frame = 2
Query:   11 VDWRKKGAV-AEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE--NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGC 799
            VDWR KGAV A VK+QG CGSCWAFS +AAVEGINKIVTG L+SLSEQELV+C  +  N GCNGG+MD AF FI  NGG+DTEEDYPY A+DG C+  +++ KVV+ID +EDVP NDE +LQKAVA+QPVSVAI+ GG  FQLY+SG+FTGRCGT+LDHGV AVGYGT+   GA YW V+NSWG  WGE GYIRMERNV    TGKCGIAM ASY                        CD Y  CP   TCCC +   N C  WGC
Sbjct:  159 VDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTAR-TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGC 422          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 4.191e-84
Identity = 149/212 (70.28%), Postives = 165/212 (77.83%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCDT  N+GCNGGLMDYAFEFI   GGI TE +YPY+A DG+CD  ++NA  V+ID +E+VP NDE AL KAVANQPVSVAI+ GG  FQ Y  G+FTG CGT LDHGV  VGYGT  +G  YW VKNSWG  WGE GYIRMER ++    G CGIAMEASY
Sbjct:  130 VDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDK-EGLCGIAMEASY 340          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.633e-83
Identity = 147/212 (69.34%), Postives = 168/212 (79.25%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            +DWR KGAV  VKDQG CGSCWAFSTIA+VEGIN+I TG L+SLSEQELVDCDTSYNEGCNGGLMDYAFEFI  N GI TE+ YPY   DG+C +   N+ VV+ID ++DVP N+E AL +AVANQP+SV+IE  G  FQ Y  G+FTGRCGT LDHGV  VGYG T +G  YWIVKNSWG  WGE+GYIRM+R ++    GKCGIAMEASY
Sbjct:  134 IDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTELDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDK-RGKCGIAMEASY 343          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 3.003e-82
Identity = 140/211 (66.35%), Postives = 169/211 (80.09%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQEL+DCDT+YN GCNGGLMDYAFE+I+ NGG+  EEDYPY   +G+C+  +  ++ VTI+ ++DVP NDEK+L KA+A+QP+SVAI+  G  FQ Y  G+F GRCG  LDHGV AVGYG+  G+DY IVKNSWG  WGE GYIR++RN  G   G CGI   AS+
Sbjct:  142 VDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRN-TGKPEGLCGINKMASF 351          
The following BLAST results are available for this feature:
BLAST of CB293761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
RD21A_ARATH9.249e-11672.24Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ1.578e-11573.00Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
ORYB_ORYSJ2.889e-10164.44Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSPL_SOLLC1.098e-10063.50Low-temperature-induced cysteine proteinase (Fragm... [more]
GCP1_ARATH2.895e-9373.46Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA3.201e-9273.24Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CYSP1_ORYSJ7.131e-9262.55Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_RICCO4.191e-8470.28Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP_HEMSP4.633e-8369.34Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
XCP2_ARATH3.003e-8266.35Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293761 ID=CB293761; Name=CB293761; organism=Citrus sinensis; type=EST; length=800bp
GCACGTAGGTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAG
ATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCAGCTGTA
GAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCA
GGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTT
TGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACA
GAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCG
GAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAA
ATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTT
GCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATT
TACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGAT
ATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGC
AGTAGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTAACGTGGCTGG
CACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAA
AGAAAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCCATCTCCAACA
AAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAACAC
TTGCTGCTGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCT
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