CB293762

Overview
NameCB293762
Unique NameCB293762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:271..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.547e-44
Identity = 88/142 (61.97%), Postives = 105/142 (73.94%), Query Frame = -2
Query:  175 SRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVL 597
            SRAITQYIA  + DKG QL     K +A + VW EVE+ +F P +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADI++ PAW+K +
Sbjct:   67 SRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAI 208          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.247e-43
Identity = 90/141 (63.83%), Postives = 102/141 (72.34%), Query Frame = -2
Query:  175 SRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVL 597
            SRAITQYIA EF DKG  L   GK +A + +  E+E+ +F P  SKL WE V KP++GMTTD   VEE E KLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADI S P+  KVL
Sbjct:   68 SRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.011e-42
Identity = 85/146 (58.22%), Postives = 107/146 (73.29%), Query Frame = -2
Query:  163 SRAITQYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVLPLLK 597
            SRAITQYIA  + D G QL        P++ VW EVE  +F P +SKL WEL  KP+ GMTTD  AV+E+EV+L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADI++ PAW K L  L+
Sbjct:   67 SRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 5.239e-42
Identity = 90/142 (63.38%), Postives = 102/142 (71.83%), Query Frame = -2
Query:  175 SRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVL 597
            SRAITQYIA  + DKG QL   G K IA + +  E+E+ +F P  SKL WE V KP++GMTTD   VEE E KLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADI S P+  KVL
Sbjct:   68 SRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.842e-42
Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = -2
Query:  163 SRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVLPLLK 597
            SRAITQYIA  + D G QL     K +  + VW EVE  +F PP++KL WEL  KP+ GMTTD AAV+E+E +L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADI++ PAW K L  L+
Sbjct:   67 SRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 3.754e-40
Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = -2
Query:  163 SRAITQYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVLPLLK 597
            SRAIT+Y+A   +  ++GT L    K  +A  LVW+EVEA QF P +SKL WELV+K +FGM TD   VEENE KLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   I++ P+W K L L K
Sbjct:   67 SRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 4.903e-40
Identity = 88/147 (59.86%), Postives = 107/147 (72.79%), Query Frame = -2
Query:  163 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVLPLLK 597
            SRAITQY+A+E+ +KG +L      K  A   VW +VE  QF P +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP VS W   I + PAWAKV+ L K
Sbjct:  116 SRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.058e-34
Identity = 80/145 (55.17%), Postives = 96/145 (66.21%), Query Frame = -2
Query:  175 SRAITQYIAQEFPDKGTQLT-CPGKPIAPLLVWK---EVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVL 597
            SRAITQYIA  + ++GT L     K IA   +     +VEA QF P +SKL WE V+K  +G+ TD A V E E KLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+I   PA  KVL
Sbjct:   68 SRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.995e-33
Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = -2
Query:  178 SRAITQYIAQEFPDKGTQLT-CPGKPI---APLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKV 597
            SRAITQYIA  + ++GT L     K I   A + +  +VE  QF P +SKL +E ++K ++G+TTD A V E E KLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+I   PA  KV
Sbjct:   68 SRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 211          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 105.916 bits (263), Expect = 1.585e-22
Identity = 61/142 (42.96%), Postives = 84/142 (59.15%), Query Frame = -2
Query:  175 SRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAWAADIISSPAWAKVL 597
            SRAI +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW   I + PA+ K +
Sbjct:   68 SRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTV 209          
The following BLAST results are available for this feature:
BLAST of CB293762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF_HYOMU9.547e-4461.97Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_ARATH1.247e-4363.83Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF2_TOBAC4.011e-4258.22Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GST11_ARATH5.239e-4263.38Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_TOBAC6.842e-4256.85Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF_SILCU3.754e-4059.73Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF6_ARATH4.903e-4059.86Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GST16_ARATH1.058e-3455.17Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH1.995e-3353.47Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE1.585e-2242.96Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293762 ID=CB293762; Name=CB293762; organism=Citrus sinensis; type=EST; length=598bp
GGGAATACAAACTACGAAGCATCAATATTCTGCAGAGATATTGATGACAA
ACGCCAAACAAGAGAATACTAACTCGAAAACCCACCTAATAGGTATTACA
AAAGATAAGTGACCACCGAGGAGCGACTAACGTCTAGAAGGTACCGAGCA
AAGTGTTCAGTGTTTGAGCAAGGGAAGGACCTTAGCCCAAGCCGGGCTGG
AAATGATATCAGCTGCCCATGCGCTAACATGGGGGCGTGCATCAAACAAC
TTCTTGACCGGGGTCCCCAACAACAAATTAATATTGGGGAGATGATGCAA
ATCGACCAAGGTGAAGCTGTCGCACGCCAAGTATTTGGACTGAGACAAAC
GGGCCTCGTAAACATCTAAAATTTTGGCAAGCTTAACTTCATTTTCTTCA
ACCGCAGCTGGATCAGTGGTCATTCCAAACATTGGCTTGTACACGAGCTC
CCAGTTGAGCTTCGATGATGGGGGGGCGAACTGGAGTGCCTCCACCTCCT
TCCATACCAATAACGGGGCGATGGGCTTGCCTGGGCATGTTAACTGGGTG
CCTTTGTCTGGAAACTCCTGGGCGATGTATTGGGTGATTGCCCTTGAT
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