CB293765

Overview
NameCB293765
Unique NameCB293765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.245e-87
Identity = 155/186 (83.33%), Postives = 172/186 (92.47%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            SVF  +V+APEDPILGVTVAYNKD  PVKLNLGVGAYRTEEGKPLVLNVVRKA+Q L+ND++R+KEYLPIVGLV+FNKLSAKLILGADSPAI++N +TTV+ LSGTGSLR G EFLA+HYHQ TIYI QPTWGNHPK+FTL+GL+VKTYRYYDPATRGLNFQGLLEDL AA  G+IVLLHACAHNP
Sbjct:   47 SVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLHACAHNP 232          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.230e-87
Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 2
Query:  131 MDSESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            M S SVF  + +APEDPILGVTVAYNKD  PVK+NLGVGAYRTEEGKPLVLNVVR+A+Q+L+N+ SRVKEYLPI GL DFNKLSAKLI GADSPAI++N V TVQ LSGTGSLR G EFLARHYH+ TIYIPQPTWGNHPKVFTL+GL+V++YRYYDPATRGL+FQGLLEDL +APSGAIVLLHACAHNP
Sbjct:    1 MASSSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLHACAHNP 190          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.747e-86
Identity = 153/186 (82.26%), Postives = 170/186 (91.40%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            SVF  +VRAPEDPILGVTVAY+KD  P KLNLGVGAYRTEEGKPLVLNVV+KA+Q+L+NDQSRVKEYLPIVGL DFNKLSAKLI GADSPAI++N V TVQ LSGTGSLR G EFLARHYH+ T+YIPQPTWGNHPK+FTL+GLSVKTYRYY+P TRGL+F+G+LEDL +AP GAIVLLHACAHNP
Sbjct:    3 SVFANVVRAPEDPILGVTVAYHKDQSPNKLNLGVGAYRTEEGKPLVLNVVKKAEQMLVNDQSRVKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHEHTVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEGMLEDLGSAPLGAIVLLHACAHNP 188          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.276e-83
Identity = 151/187 (80.75%), Postives = 167/187 (89.30%), Query Frame = 2
Query:  140 ESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            +SVF  + RAPEDPILGVTVAYN D  PVK+NLGVGAYRTEEGKPLVL+VVRKA+Q L+ND SRVKEY+PIVG+ DFNKLSAKLILGADSPAI ++ VTTVQ LSGTGSLR GAEFL  HYHQ  IYIP+PTWGNHPKVF L+GLSV+ +RYYDPATRGL+F+GLLEDL AAPSGAIVLLHACAHNP
Sbjct:    2 DSVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHYHQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLHACAHNP 188          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 308.531 bits (789), Expect = 2.177e-83
Identity = 149/188 (79.26%), Postives = 167/188 (88.83%), Query Frame = 2
Query:  137 SESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S+SVF  +VRAPEDPILGVTVAYNKD  P+KLNLGVGAYRTEEGKPLVL+VVR+ ++ LLND SR KEY+PIVGL DFNKLSAKLI GADSPAI++N VTTVQ LSGTGSLR G EFLA+HYHQ  IY+P PTWGNH KVF L+GL+VKTYRYY PATRGL+FQGLLEDL +APSG++VLLHACAHNP
Sbjct:   14 SDSVFAHLVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLHACAHNP 201          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 4.560e-65
Identity = 121/186 (65.05%), Postives = 145/186 (77.96%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S+   ++ APEDP+L V  A   D  PVKLNL  G YRTEEGKPLVL+VVR+A+Q L ND    KEYLP+ GL +FNKLS KLILG DSPA+K+N V T Q LSGTGSLR GAEFLA H  +  I++P PTWGNHP++FTL+GLSV+ +RYYDP +RGL+F+G+LEDL AAP GAIV+L ACAHNP
Sbjct:    3 SILSSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLANDLD--KEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVLQACAHNP 186          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.773e-54
Identity = 101/193 (52.33%), Postives = 137/193 (70.98%), Query Frame = 2
Query:  122 RNLMDSESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            R    + + +  + + PEDPILGV++AYNKDT P K+NLGVGAYR E GKP VL+ V+KAD+ +  + +   EY PIVG+  FN+L+A+L LG +   IK+  + TVQ +SGTG+LR  A+F AR     T Y+P PTWGNH  +F  +G+ VK+Y YY+PAT GLNF+ + +D+ AAP G+I+LLHACAHNP
Sbjct:   19 RQFSTNTNWWANVQKGPEDPILGVSIAYNKDTSPSKINLGVGAYRDENGKPYVLDCVKKADKKIY-EANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFARFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSIILLHACAHNP 210          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.390e-52
Identity = 105/186 (56.45%), Postives = 129/186 (69.35%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S F  I  AP DPILGV+ A+  DT   KLNLGVGAYRTEE +P VL VV KA+ L+L ++ + KEYL I GL  FNK +A+L+LGAD+PAIK   V TVQ LSGTGSLR GA  + R++    + I  PTWGNH  +F  + +    YRYYDP T GL+F+G++ED+ AAP G  VLLH CAHNP
Sbjct:   52 SRFEGIPMAPPDPILGVSEAFRADTSDAKLNLGVGAYRTEELQPYVLKVVNKAENLML-ERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNP 236          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50
Identity = 99/186 (53.23%), Postives = 127/186 (68.28%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S F  I  AP DPILGV+ A+  DT  +KLNLGVGAYRTEE +P VLNVV+KA+ L+L ++   KEYLPI GL  FNK +A+L+ GA  P IK+  V T+Q LSGTGSLR  A  + R++    + I  PTWGNH  +F  + +    YRYYDP T GL+F+G++ D+  AP G+ +LLH CAHNP
Sbjct:   51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLML-ERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGCAHNP 235          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATM_CHICK (Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.969e-48
Identity = 96/189 (50.79%), Postives = 125/189 (66.14%), Query Frame = 2
Query:  137 SESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYH-QLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            + S +  +   P DPILGVT A+ +DT   K+NLGVGAYR + GK  VLN VRKA+ ++   +   KEYLPI GL DF + SA+L LG +S A K     TVQ +SGTGSLR GA FL R +     +Y+P+P+WGNH  +F  +GL ++ YRYYDP T  L+F G +ED+   P  +I+LLHACAHNP
Sbjct:   22 ASSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKSYVLNCVRKAEAMIAAKKMD-KEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNP 209          
The following BLAST results are available for this feature:
BLAST of CB293765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AAT3_ARATH3.245e-8783.33Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_ORYSJ7.230e-8781.58Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AATC_DAUCA2.747e-8682.26Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AAT2_ARATH1.276e-8380.75Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AAT1_MEDSA2.177e-8379.26Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AAT4_ARATH4.560e-6565.05Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AATM_DICDI2.773e-5452.33Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATM_LUPAN3.390e-5256.45Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AAT5_ARATH4.144e-5053.23Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_CHICK2.969e-4850.79Aspartate aminotransferase, mitochondrial OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06cf02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cf02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293765 ID=CB293765; Name=CB293765; organism=Citrus sinensis; type=EST; length=702bp
GCCCTATGTACAGTTAAACTAACCAAACCACTCCGAGGCCACTACTATAT
TAAACCCAAACATAATTTTCTCTTCACATTTTTTTCCCCCACAAACTCTC
TCATTTCATTGATTTCTTGAAAGAAATTTAATGGATTCTGAATCAGTGTT
TGGAAAGATTGTTCGTGCTCCTGAAGATCCCATTCTAGGGGTCACTGTTG
CTTATAACAAGGATACAATCCCAGTCAAGTTGAACTTGGGTGTTGGTGCT
TACCGAACTGAGGAAGGGAAACCTCTGGTTCTGAATGTAGTGAGAAAGGC
AGATCAGCTCTTACTGAATGACCAGTCACGGGTCAAAGAGTATCTTCCCA
TTGTTGGACTTGTGGATTTTAATAAATTGAGTGCAAAGCTCATCCTTGGT
GCTGACAGCCCTGCGATTAAAGACAACACAGTGACCACCGTTCAGCGCTT
GTCTGGCACTGGTTCTTTGAGGGCTGGAGCTGAGTTTCTGGCAAGGCATT
ATCACCAACTTACCATATATATTCCACAGCCAACATGGGGAAACCATCCC
AAAGTTTTCACTTTATCAGGATTGTCTGTGAAGACCTACCGCTATTATGA
TCCAGCAACACGTGGGCTAAACTTCCAAGGCTTGCTGGAGGATCTTATGG
CTGCACCATCCGGAGCTATAGTTCTTCTTCATGCATGTGCTCATAATCCA
AC
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