CB293768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.057e-73 Identity = 137/201 (68.16%), Postives = 158/201 (78.61%), Query Frame = 2 Query: 137 MNIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS-SCSKDAERNISEPPNQQASQTSVKMPTQQSSGISSPWAVDDFLQFSDFESSGK-KEQLEFGELEWIADMGIFNDQLPQEALAAAEVPQLPVS 733 M IQCDVCE+APAT+ICCADEAALCAKCDVEVHAANKLASKHQRL L LS K PPCDIC EKAAFIFCVEDRAL C+DCDE H+P + SANHQRFLATGIRVALSS SC+++ E+N +P NQQ+ K PTQQ + S WA D+F +SD + S K KEQL+ GEL+W+A+MG+F DQ QEAL AEVP+L S Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHFDPSNQQSLS---KPPTQQPAAPSPLWATDEFFSYSDLDCSNKEKEQLDLGELDWLAEMGLFGDQPDQEALPVAEVPELSFS 198
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.604e-72 Identity = 140/215 (65.12%), Postives = 162/215 (75.35%), Query Frame = 2 Query: 137 MNIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSS-CSKDAERNISEPPN--QQASQTSVKMPTQQ----SSGISSPWAVDDFLQFSDFESSGKKEQLEF--GELEWIADMGIFNDQLPQEALAAAEVPQLPVSQSNNLIS 754 M IQCDVCE+APATVICCADEAALC +CD+E+HAANKLASKHQRL L LS K P CDICQEKAAFIFCVEDRAL C+DCDE IH S SANHQRFLATGI+VAL+S+ CSK+ E+N EP N Q+A+Q K +QQ SS PWAVDDF FSD ES+ KK QL+ GEL+W +DMG F DQ+ +AL AAEVP+L VS ++ S Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQPEPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGELDWFSDMGFFGDQINDKALPAAEVPELSVSHLGHVHS 215
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33 Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 2 Query: 137 MNIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS 460 M IQC+VCE A ATV+CCADEAALC CD ++HAANKLA KHQR+ L ++ +P CDICQE + F FC++DRAL C+ CD IH+ + HQRFL TGI+V L S Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLES 108
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.175e-30 Identity = 67/150 (44.67%), Postives = 91/150 (60.67%), Query Frame = 2 Query: 137 MNIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQR--LLLQCLSNKLPP-CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDAERNISEPPNQQ---ASQTSVKMPTQQSSGISSP 568 M I+CDVC++ A+V C ADEA+LC CD +VH ANKLASKH R LL SN P CDICQ+K A +FC +DRA+ CKDCD IH+ + H RFL TG++++ +SS K ++ S + Q +S+ P +S+P Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAP 150
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.500e-19 Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 2 Query: 149 CDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR--FLATGIRVALSSSCSKDAERNISEPPNQ-----------QASQTSVKMPTQ-QSSGISSPWAV-DDFLQFSDFESSGKK 622 CD C A TV C AD A LC+ CD +VHAAN+LAS+H+R+ + C C+ A FC D A C CD IHS L+ HQR L S++ + E +++P N+ +A S +P ++SG ++ +++ D+FL D+ SS K+ Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLVDYSSSDKQ 175
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.027e-16 Identity = 43/113 (38.05%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 149 CDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDAERN 487 CD C+ AT+ C AD A LC CD ++H ANKLAS+H+R+ L C++C++ A + C D A C CD IHS LS H+R T A+ + S + N Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVN 111
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 53/169 (31.36%), Postives = 75/169 (44.38%), Query Frame = 2 Query: 149 CDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDAERNISEPPNQQASQTSVKMPTQQSSGISSPWAVDDFLQFSDFESSGKKEQLEFGELEWI 655 CD C+ A A + C D A LC CD +VHAANKLAS+H R+ + C++C++ A + C D A C CD IHS L+ H+R T ++SS S T+V +DD FSD + +G +E+ E W+ Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGS--------------VKHTAVNF-------------LDD-CYFSDIDGNGSREEEEEEAASWL 137
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.520e-15 Identity = 44/110 (40.00%), Postives = 54/110 (49.09%), Query Frame = 2 Query: 149 CDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDA 478 CD C A TV C AD A LC CD VHAAN++AS+H+R+ + C C+ A C D A C CD IHS L+ HQR I ++SCS A Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR---VPILPLSANSCSSMA 113
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14 Identity = 36/92 (39.13%), Postives = 48/92 (52.17%), Query Frame = 2 Query: 149 CDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 424 CD C TV C AD A LC CD +VH+AN++AS+H+R+ + C+ C+ A C D A C CD +HS L+ HQR Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
BLAST of CB293768 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 2 Query: 149 CDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGS 403 CD C+ + A V C AD A LC CD +VH AN+L +KH R LL CD C E + +FC +R++ C++CD H+ S Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESPSSLFCETERSVLCQNCDWQHHTASS 88 The following BLAST results are available for this feature:
BLAST of CB293768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293768 ID=CB293768; Name=CB293768; organism=Citrus sinensis; type=EST; length=760bpback to top |