CB293838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 380.178 bits (975), Expect = 7.686e-105 Identity = 182/219 (83.11%), Postives = 188/219 (85.84%), Query Frame = -1 Query: 164 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQCS 820 MVRSS TH+GWRT+ADGDAISIFGSSH+WIDHNSLSHCADGLVDAVMGSTAITISNNH+THHNEVMLLGHSDSY RDK MQVTIAYNHFG GLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRY AP N FAKEVTKRVDT AS WKGWNWRSEGDLL NGAYFT AKSSS+VG ITS AGAL CR+ RQCS Sbjct: 212 MVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAGALPCRRGRQCS 430
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 2.093e-102 Identity = 175/218 (80.28%), Postives = 188/218 (86.24%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 MVRSSP+H+GWRT+ADGDA+SIFGSSHIWIDHNSLSHCADGLVDAVMGSTAIT+SNNH THHNEVMLLGHSDSYT+DK MQVTIAYNHFGEGL+QRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRY AP++ FAKEVTKRV+T AS+WK WNWRSEGDLLLNGA+F P AK SSMV +ITS AGAL CRK R C Sbjct: 253 MVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC 470
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.314e-96 Identity = 169/218 (77.52%), Postives = 184/218 (84.40%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 MVRSSP+HYG+R++ADGDAISIFGSSHIWIDHNSLS+CADGLVDAVM STAIT+SNN THHNEVMLLGHSDSYTRDK MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNR+ AP+N FAKEVTKR T S+WK WNWRSEGDL LNGA+FT AKSSS+VG++TS +GAL CR R+C Sbjct: 199 MVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 1.716e-96 Identity = 169/218 (77.52%), Postives = 180/218 (82.57%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 MVRSSP+HYGWRT+ADGD ISIFGSSHIWIDHNSLS+CADGL+DAVM STAITISNN+ THHNEVMLLGHSD+YTRDK MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA+PTINSQGNRY AP N FAKEVTKR QW+ WNWRSEGDL LNGA+FT AKSSS+VG IT AGAL CR R+C Sbjct: 200 MVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFLNGAFFTRSGSGLGASYARASSLAAKSSSLVGVITYNAGALNCRGGRRC 417
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 8.518e-96 Identity = 164/218 (75.23%), Postives = 179/218 (82.11%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 MVRSS +HYGWRT+ADGD ISIFGSSHIWIDHNSLS CADGL+DA+MGSTAITISNN++THHNE +LLGH+DSYTRDK MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR+ AP N FAKEVTKRV +W WNWRS+GDL+LNGAYFT AKSSS+VG +TS +GAL CR C Sbjct: 201 MVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAKSSSLVGMLTSSSGALKCRIGTLC 418
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 350.132 bits (897), Expect = 8.518e-96 Identity = 165/218 (75.69%), Postives = 182/218 (83.49%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 MVRSSP+HYGWRT+ADGDAISIFGSSHIWIDHNSLS+CADGL+DA+MGSTAITISNN+MTHHNEVML+GHSDSYTRDK MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHW MYAIGGSANPTINSQGNR+ AP N FAKEVTKRV + +WK WNWRS+GDL+LNGAYFT AK +S+V +T +GAL CR +C Sbjct: 223 MVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPASVVSMLTYSSGALKCRIGMRC 440
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 6.749e-93 Identity = 154/218 (70.64%), Postives = 178/218 (81.65%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 MVRSSP H+GWRT++DGD +SIFG SH+W+DH S S+C DGL+DA+MGSTAIT+SNNHMTHH++VMLLGHSD+Y+RDK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR+ AP F+KEVTK D S+WK WNWRS GDLLLNGA+FTP AK SS+VG +TS +GAL CRK +C Sbjct: 191 MVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 333.183 bits (853), Expect = 1.078e-90 Identity = 153/217 (70.51%), Postives = 176/217 (81.11%), Query Frame = -1 Query: 167 VRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 817 VR SP+HYGWRT +DGDA+SIFG SH+W+DH SLS+CADGL+DA+ GSTAITISNN+++HHN+VMLLGHSDSYTRDK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNNDYTHW+MYAIGGSA PTINSQGNR+ AP + KEVTK D S+WK WNWRSEGDL LNGA+FTP A+ SS+V S+TS AGAL CRK +C Sbjct: 192 VRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 4.095e-90 Identity = 158/217 (72.81%), Postives = 178/217 (82.03%), Query Frame = -1 Query: 167 VRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 817 VRSSP+ G+R ADGDAI+IFGSSHIWIDHNSLS+C DGLVD V GSTAITISNNH THH+EVMLLGH+DSYTRDK MQVT+AYNHFGEGLIQRMPRCRHGYFHVVNNDYTHW+MYAIGGSANPTINSQGNR+ AP N AKEVTKR+DT ++W WNWRSE DLL+NGA+FTP AK +SMV +IT+ AGAL+CR+ + C Sbjct: 236 VRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTP-SGEGASGDSQTLSLPAKPASMVDAITASAGALSCRRGKPC 451
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.746e-86 Identity = 146/218 (66.97%), Postives = 171/218 (78.44%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 M++ P H GW +DGDA++IFG H+WIDH SLS+C DGL+DA+ GSTAITISNNHMTHH++VMLLGHSDSYT+DK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNNDYTHWEMYAIGGSA+PTI SQGNR+ AP F KEVTK D S+W+ WNWRSEGD+LLNGAYF A+ SS+VGSIT+ AG L+CR+ R+C Sbjct: 192 MIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 409 The following BLAST results are available for this feature:
BLAST of CB293838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293838 ID=CB293838; Name=CB293838; organism=Citrus sinensis; type=EST; length=820bpback to top |