CB293887

Overview
NameCB293887
Unique NameCB293887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11809 contig Csv1_Contig11809:364..1161. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.167e-52
Identity = 93/132 (70.45%), Postives = 112/132 (84.85%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSH 403
            ADVD+YKFDPW+LPAKA+FGE+EWYFFSPRDRKYPNGARPNRAA SGYWKATGTDK +++T  G   + +GVKKALVFY G+PPKGVK++WIMHEYRL +N K  +      K +S+RLDDWVLCRIY+K++
Sbjct:   50 ADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTG-GGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDN-KPTHICDFGNKKNSLRLDDWVLCRIYKKNN 179          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.952e-49
Identity = 113/231 (48.92%), Postives = 140/231 (60.61%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVS-LPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDY----SMLSNFLSENQTSHTGSESNPL----FNSGILEQHH 676
            +VDIYKFDPW LP K  FGE EWYFFSPR+RKYPNG RPNRAA SGYWKATGTDK I + S      N+GVKKALVFYKGRPPKG+KT+WIMHEYRL ++ K         ++ SMRLD+WVLCRIY+K   S L        D  L E+E K  +++             T++   ++ S ++LL+ MDY    S + NF   +      SES+      FN   +  HH
Sbjct:   43 EVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGS-----SNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRK-----ASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEGFMDEVLMEDETKVVVNEAERR-TEEEIMMMTSMKLPRTCSLAHLLE-MDYMGPVSHIDNFSQFDHLHQPDSESSWFGDLQFNQDEILNHH 261          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.200e-48
Identity = 99/189 (52.38%), Postives = 116/189 (61.38%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMD 577
            D+D+YKFDPWDLP+KA FGEKEWYFFSPRDRKYPNG+RPNR A SGYWKATGTDKII A         +G+KKALVFY G+ PKG KTNWIMHEYRL E+ ++           S +LDDWVLCRIY+K+  S                         + P+      H+T  N   SSS S L D +D
Sbjct:   48 DIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADG-----RRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRS---------HGSSKLDDWVLCRIYKKTSGS---------------------QRQAVTPVQACREEHST--NGSSSSSSSQLDDVLD 199          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.445e-46
Identity = 99/209 (47.37%), Postives = 126/209 (60.29%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSE 634
            A++D+YK+DPW+LP  A +GEKEWYFFSPRDRKYPNG+RPNR+A SGYWKATG DK I         + +G+KKALVFY G+ PKG KTNWIMHEYRLA+  ++     +R K +S+RLDDWVLCRIY K   +          +  E  EEK  + + ++P    PP   +      +S     L   D S     +S   TS   SE
Sbjct:   40 AEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI------GLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS-----VRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEEKPKVTEMVMP---PPPQQTSEFAYFDTSDSVPKLHTTDSSCSEQVVSPEFTSEVQSE 234          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.876e-46
Identity = 93/188 (49.47%), Postives = 117/188 (62.23%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDA 571
            A++D+YKFDPW LP KA FGEKEWYFFSPRDRKYPNG+RPNR A SGYWKATGTDKII         + +G+KKALVFY G+ PKG KTNWIMHEYRL E  +         ++ S +LDDWVLCRIY+K                  +   +  ++D  +   R   ++ T+     SS F ++LD+
Sbjct:   47 AEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-----STEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR---------RNGSTKLDDWVLCRIYKK------------------QSSAQKQVYDNGIANAREFSNNGTSSTTSSSSHFEDVLDS 202          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.309e-45
Identity = 84/130 (64.62%), Postives = 98/130 (75.38%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 397
            A++D+YKFDPW LP+KA FGEKEWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK+I           +G+KKALVFY G+ PKG KTNWIMHEYRL E  +         ++ S +LDDWVLCRIY+K
Sbjct:   47 AEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVI-----STEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR---------RNGSTKLDDWVLCRIYKK 162          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.809e-45
Identity = 86/134 (64.18%), Postives = 104/134 (77.61%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKM-RPKDSSMRLDDWVLCRIYRKSHV 406
            A+VD+YKF+PWDLP +A  GEKEWYFFSPRDRKYPNG RPNRAA +GYWKATG DK      VG+ +  + +KKALVFY G+PPKGVKTNWIMHEYRLA+  ++    K+ +   +++RLDDWVLCRIY K  V
Sbjct:   42 AEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADK-----PVGSPRA-VAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGV 169          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.469e-44
Identity = 85/144 (59.03%), Postives = 104/144 (72.22%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIY-RKSHVSLPTSAGAAS 436
            A++D+YKFDPW LP  A +GEKEWYFFSPRDRKYPNG+RPNRAA SGYWKATG DK +         + + +KKALVFY G+ PKG KTNWIMHEYRLA+  ++        K +S+RLDDWVLCRIY +K  +  P +A  A+
Sbjct:   42 AEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV------GSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSAR------KKNSLRLDDWVLCRIYNKKGGLEKPPAAAVAA 173          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44
Identity = 81/130 (62.31%), Postives = 100/130 (76.92%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 397
            A++D+YKF+PW+LP  A +GEKEWYFFS RDRKYPNG+RPNRAA +GYWKATG DK I         + +G+KKALVFY G+ PKG+KTNWIMHEYRLA    N++ +    K +++RLDDWVLCRIY K
Sbjct:   83 AEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI------GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLA----NVDRSASTNKKNNLRLDDWVLCRIYNK 202          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.565e-43
Identity = 90/193 (46.63%), Postives = 112/193 (58.03%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSM 586
            A++D+Y+ DPWDLP +A FG +EWYFF+PRDRKYPNG+RPNRAAASGYWKATG DK +L           G+KKALVFY G+PP+GVKT WIMHEYRLA+               ++RLDDWVLCR+Y K                 + E EK          + +  S   T  P+     S+    MDYS+
Sbjct:   50 AELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNG-----RTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKK----GGAAAAAGAGALRLDDWVLCRLYNK-----------------KNEWEKMQSRKEEEEAMAAAQSWGETRTPESEVVDSDAFPEMDYSL 216          
The following BLAST results are available for this feature:
BLAST of CB293887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC18_ARATH7.167e-5270.45NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC29_ARATH1.952e-4948.92NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC72_ARATH8.200e-4852.38NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC2_ARATH3.445e-4647.37NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC19_ARATH5.876e-4649.47NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH1.309e-4564.62NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC71_ORYSJ3.809e-4564.18NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC48_ORYSJ2.469e-4459.03NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NA102_ARATH4.211e-4462.31NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC67_ORYSJ3.565e-4346.63NAC domain-containing protein 67 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06de03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293887 ID=CB293887; Name=CB293887; organism=Citrus sinensis; type=EST; length=798bp
GCACTAGGCTGATGTTGATATTTACAAGTTTGATCCATGGGATTTACCAG
CCAAGGCTGCCTTCGGTGAGAAAGAGTGGTATTTTTTCAGTCCTAGAGAC
CGAAAGTACCCGAATGGAGCCAGGCCGAACAGGGCAGCTGCATCCGGGTA
TTGGAAGGCGACAGGCACGGATAAGATCATCTTGGCAACATCTGTGGGAG
CTCATCAAGAAAACATTGGTGTGAAGAAAGCTCTTGTGTTCTACAAAGGC
AGGCCTCCGAAGGGAGTTAAAACTAATTGGATTATGCATGAGTATCGCCT
TGCTGAAAACCCCAAGAATCTCAATCACACCAAGATGAGGCCCAAAGACT
CTTCCATGAGGTTGGATGATTGGGTTCTCTGCCGCATCTACCGCAAGTCC
CATGTCTCCCTGCCAACATCAGCCGGTGCAGCAAGTGATCATGATCTAGA
AGAAGAGGAGGAAAAATTTAACCTTCATGACACCCTGTTGCCGATCCTGA
GAAGTCCACCAAGCCACAACACTACTCTCAATCCTCAGAAATCTTCATCC
TTCTCCAACTTATTGGATGCAATGGACTACTCAATGCTGAGTAATTTTCT
ATCCGAGAACCAAACGAGTCATACCGGATCTGAATCCAACCCGCTGTTCA
ATTCAGGGATTTTAGAGCAGCACCATTCTTCATTCAACAATGGCAATGGC
AATGGCGCCAACACGAACACAAGTTGCACTAACAGTTTTCTGATTCAAAA
ACTACCTCAGTTGAACTATTCAGTTTTCAACAATATGGAGAACCAGCA
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