CB293902

Overview
NameCB293902
Unique NameCB293902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB293902 vs. ExPASy Swiss-Prot
Match: MINP1_MOUSE (Multiple inositol polyphosphate phosphatase 1 OS=Mus musculus GN=Minpp1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 3 
Query:  360 PSEIPDGCTPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQKVPGWLQGWKSPWQGKLKGGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLF 749
            P  +   CTP+ L  + RHGTR PT K++R+L++L   L+   RE+++ GS   +V   L  W   W G    G+L+ KG  ++  L +R+   +PDLFS E +  +  I +++  R   S+ AF  GL+
Sbjct:   71 PELLAGTCTPVQLVALIRHGTRYPTTKQIRKLKQLQGLLQT--RESRDGGS---QVAAALAEWPL-WYGDWMDGQLVEKGRQDMRQLALRLAALFPDLFSRENYDRLRLITSSK-HRCVDSSAAFLQGLW 193
The following BLAST results are available for this feature:
BLAST of CB293902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MINP1_MOUSE7.009e-1234.62Multiple inositol polyphosphate phosphatase 1 OS=M... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_06de11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293902 ID=CB293902; Name=CB293902; organism=Citrus sinensis; type=EST; length=783bp
GGTTTGATGATTGCATCATTGTCGAGGGGTAAAAACTATAAATACGTGGC
AGGGCATTAACATTGCTTCCAAATCAATCGTTAATCAAATCCCCGATTAT
GTAAGCACTGTAGTTACCGACACACCGAATCTTACTCGTTCGTGAGCGGA
GCGTCTAAGCTGAGAAATTCTTTCATCATCAAAGCACAAAACCAGAGACG
GTGAAAATGAAGGAAGCTACGGCTTCTTTTATGTTGATCCTGTGCGTACT
TTTGTTAGCGCATCTAAACGACGCCGTTCAAAATTTCGACGTTCGACAGC
ACCTCTCGACTGTCTCAAGATACGACTTCGTAAAAGATGTCGTTGATAAG
AACTTTGTACCTTCTGAAATTCCCGATGGATGTACTCCAATTCACTTAAA
TCTTGTGGCAAGGCACGGGACTCGTGCACCCACGAAGAAACGGATGAGGG
AGTTGGAAAGATTGGCTGATCATTTGGAAGTACTTATAAGGGAAGCCAAA
GAAAAGGGTTCGTCTTTACAGAAAGTTCCGGGCTGGTTACAGGGATGGAA
GTCTCCCTGGCAAGGGAAACTGAAGGGTGGTGAATTGATTAGCAAAGGAG
AAGATGAGTTATATGATCTCGGAATCAGGATTAGAGAAAAATATCCAGAT
TTGTTTAGCGAGGAATATCACCCGGATGTCTATCCCATTAAGGCTACTCA
GGTTCCTCGCGCATCTGCGAGTGCAGTAGCATTTGGCATGGGGCTCTTTA
ATGAGAGAGGGACTCTAGGACCTGNGCGCCATC
back to top