CB293984

Overview
NameCB293984
Unique NameCB293984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293984_ssr12 microsatellite CB293984_ssr12:12..39. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8379 contig Csv1_Contig8379:67..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.295e-111
Identity = 203/232 (87.50%), Postives = 220/232 (94.83%), Query Frame = 3
Query:   93 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            L REQYVYLA ++EQAERYEEMVEFMQK+VVGSTPA+ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN++HVSLVK YRSKVE EL+ VCA+IL LL++NL+PSA+ASESKVFYLKMKGDYHRY+AEFK+GDERK A EDTM SY+AAQDIA ADL PTHPIRLGLALNFSVFYYEILNQSDKAC+MAKQAFEEAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    4 LNREQYVYLANVSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCATILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTL 235          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 397.897 bits (1021), Expect = 3.314e-110
Identity = 203/240 (84.58%), Postives = 219/240 (91.25%), Query Frame = 3
Query:   69 MATTVPDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            MA  +P++L+REQ +YLAKLAEQAERYEEMV+FM KLV+ STPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHV LVKEYR KVE ELS VCA IL+LLE+NL+PSAT SESKVFYLKMKGDY+RY+AEFKIGDERK A EDTM SY+AAQ+IA  DL PTHPIRLGLALNFSVFY+EILN SDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    1 MAALIPENLSREQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTL 240          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 396.741 bits (1018), Expect = 7.383e-110
Identity = 204/240 (85.00%), Postives = 223/240 (92.92%), Query Frame = 3
Query:   69 MATTVPDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            MATT    L+R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHVSLVK+YRSKVE ELS +C+ ILRLL+++LIPSATASESKVFYLKMKGDYHRY+AEFK GDERK A EDTM +Y+AAQD+A ADLAPTHPIRLGLALNFSVFYYEILN S+KACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    1 MATT----LSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTL 236          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.066e-108
Identity = 199/232 (85.78%), Postives = 217/232 (93.53%), Query Frame = 3
Query:   93 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            L R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKN+EHVSLVK+YRSKVE ELS VC+ IL+LL+++LIPSA ASESKVFYLKMKGDYHRYMAEFK GDERK A EDTM +Y+AAQDIA AD+APTHPIRLGLALNFSVFYYEILN SDKAC+MAKQAFEEAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    5 LGRDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTL 236          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 382.489 bits (981), Expect = 1.441e-105
Identity = 196/236 (83.05%), Postives = 220/236 (93.22%), Query Frame = 3
Query:   81 VPDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            +P++LTREQ +YLAKLAEQAERYEEMV+FM KLV+GS  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN+EHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA+A ESKVFYLKMKGDY+RY+AEFK+G+ERK A EDTM +Y+AAQDIA A+LAPTHPIRLGLALNFSVFYYEILN S+KACSMAKQAFEEAIAELDT+GEESYKDSTLIMQLLR+ LTL
Sbjct:    3 LPENLTREQCLYLAKLAEQAERYEEMVKFMDKLVIGSG-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAELDTMGEESYKDSTLIMQLLRDNLTL 237          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 2.081e-104
Identity = 196/236 (83.05%), Postives = 217/236 (91.95%), Query Frame = 3
Query:   81 VPDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            VP++LTREQ +YLAKLAEQAERYEEMV+FM +LV  S  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA A ESKVFYLKMKGDY+RY+AEFK+G+ERK A EDTM +Y+AAQDIA A+LAPTHPIRLGLALN+SVFYYEILN S+KACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    3 VPENLTREQCLYLAKLAEQAERYEEMVKFMDRLVAVSA-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTL 237          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 4.202e-97
Identity = 179/232 (77.16%), Postives = 207/232 (89.22%), Query Frame = 3
Query:   93 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            ++RE+ VY+AKLAEQAERYEEMVE+M+K V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEEGR NEEHV+L+KEYR K+E ELS +C  IL+LL+++L+PS+TA+ESKVFYLKMKGDYHRY+AEFK G ERK A E TM +Y+AAQDIA ADLAPTHPIRLGLALNFSVFYYEILN  DKAC++AKQAF+EAI+ELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    1 MSREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTL 231          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 349.747 bits (896), Expect = 1.035e-95
Identity = 176/232 (75.86%), Postives = 203/232 (87.50%), Query Frame = 3
Query:   93 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            + RE+ VY+AKLAEQAERYEEMV+FM+K V  S  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NEEHV  +KEYRSK+E ELSD+C  IL+LL++NLIPSA+  +SKVFYLKMKGDYHRY+AEFK G ERK A E T+ +Y+AAQDIA  +LAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    1 MAREENVYMAKLAEQAERYEEMVQFMEK-VSTSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVKCIKEYRSKIESELSDICDGILKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTL 231          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 348.591 bits (893), Expect = 2.306e-95
Identity = 173/230 (75.22%), Postives = 202/230 (87.83%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK A E+T+ +Y+AAQDIA A+LAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTL 234          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.306e-95
Identity = 173/230 (75.22%), Postives = 202/230 (87.83%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK A E+T+ +Y+AAQDIA A+LAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTL 234          
The following BLAST results are available for this feature:
BLAST of CB293984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SOYBN2.295e-11187.5014-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
14310_SOLLC3.314e-11084.5814-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
14338_ARATH7.383e-11085.0014-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH1.066e-10885.7814-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14331_SOLLC1.441e-10583.0514-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433D_TOBAC2.081e-10483.0514-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14333_ORYSJ4.202e-9777.1614-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_SOLLC1.035e-9575.8614-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
14336_SOLLC2.306e-9575.2214-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU2.306e-9575.2214-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_04af04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04af04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293984 ID=CB293984; Name=CB293984; organism=Citrus sinensis; type=EST; length=790bp
GCCCGATGCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATCACACTT
TCAGAGCCTGTGAAAAAGATGGCGACAACAGTTCCGGACCACCTGACGAG
AGAGCAGTACGTGTACTTAGCCAAGCTAGCCGAGCAAGCCGAGCGTTACG
AAGAGATGGTGGAGTTCATGCAGAAGCTGGTTGTCGGCTCGACTCCAGCC
GCCGAGCTGACGGTCGAGGAGCGAAACCTCCTCTCAGTGGCCTACAAGAA
CGTAATCGGCTCACTCCGCGCCGCGTGGCGCATCGTGTCGTCGATCGAGC
AGAAGGAGGAGGGGAGGAAGAACGAGGAACACGTGTCGCTCGTGAAAGAG
TACAGATCGAAGGTGGAGAAGGAGCTTTCGGATGTGTGCGCGAGTATTTT
GAGGTTGTTGGAAGCGAATTTGATTCCGTCGGCTACGGCGAGTGAGTCGA
AAGTGTTTTATTTGAAAATGAAGGGAGATTATCATCGTTACATGGCCGAG
TTTAAGATTGGCGATGAGCGGAAAGCCGCCGGTGAAGACACTATGCAATC
TTACGAAGCTGCTCAGGATATTGCTGGGGCTGATCTCGCGCCGACGCATC
CGATAAGGCTGGGATTAGCTCTCAATTTCTCGGTGTTTTACTACGAGATT
CTCAATCAATCTGATAAGGCATGCAGCATGGCTAAGCAGGCATTTGAGGA
AGCAATTGCTGAGCTAGACACTTTGGGAGAAGAATCCTACAAGGACAGCA
CCCTCATTATGCAACTCCTAAGGGAGTACCTCACTCTTTG
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