CB293996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 4.524e-76 Identity = 141/230 (61.30%), Postives = 157/230 (68.26%), Query Frame = 2 Query: 116 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATN------------------------------SRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 MAGRYD NPFDEE+VNPFS+P + P + RKEEA ARAGIV+EEKNWPPFFPIIHHDI NEIPIHL+ LQYVAF + LGL LCL WN+V+VT AWIKGEGVKIWFLAIIYFIAGVPGAY LWYRPLYRAFRT+SA+KFGW F+ YLLHIG+CI A+VAPPI+FKGKSLTG L A+DV Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPRSAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCILAAVAPPIVFKGKSLTGILSAIDV 230
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.482e-74 Identity = 142/253 (56.13%), Postives = 161/253 (63.64%), Query Frame = 2 Query: 116 MAGRYDSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSR----------------------------------------------------KEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 MA RYD NPF +EEEVNPF+ N+ VPPA+NSR KE+AAARAGIV+E KNWPPFFP+IHHDIANEIP+HLQRLQYV FATYLGL LCL WNI+AVTTAWIKGEGV IW LA+IYFIAGVPG YVLWYRPLYRAFRT+SA+ FGW FL Y+LHI +C+FA+VAPP++FKGKSL G LPA+DV Sbjct: 1 MANRYDPNPFAEEEEVNPFA----------------------NARGVPPASNSRLSPLPPEPVGFDYGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDV 231
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.355e-71 Identity = 130/222 (58.56%), Postives = 153/222 (68.92%), Query Frame = 2 Query: 125 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNS-------------------------RKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 RY S+ FD+ E+NPF++P + P + RKE+A A+AGIV+EEKNWPPFFP+IHHDI+NEIPIHLQR+QYVAF + LGL +CLLWNIVAVTTAWIKGEG IWFLAIIYFI+GVPGAYV+WYRPLYRA RT+SA+KFGW F YL HI +C+FA+VAPPIIFKGKSLTG LPA+DV Sbjct: 3 RYQSHSFDDGEINPFANPTSVPAATSKLSPLPPEPYDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDV 224
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.840e-70 Identity = 133/228 (58.33%), Postives = 156/228 (68.42%), Query Frame = 2 Query: 116 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNS--ASVPPATNS--------------------------RKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 MAGRYD NPFDE++VNPF+ +V N A+V +S R+EEAA+RAGIV+EEKNWPPFFPIIHHDI+NEIPIHLQR+QY+AF++ LGL CL WNI+A T AWIKG GV IW LAIIYFI+GVPGAYVLWYRPLY A RTESA+KFGW FL YL+HI +CI+++VAPP FKGKSL G LPA+DV Sbjct: 1 MAGRYDRNPFDEDDVNPFAGGSVPPASNSRMPPLPHEPGFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFCIWSAVAPPFPFKGKSLAGILPAIDV 228
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 260.381 bits (664), Expect = 6.996e-69 Identity = 132/233 (56.65%), Postives = 155/233 (66.52%), Query Frame = 2 Query: 116 MAGRYDSNPFDEE-EVNPFSDPAV-------RXXXXXXXXXXXXXXXTTNSASVPPATNS-------------------------RKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 M GRYD N FDE+ EVNPF++P R T + P + + RK++AAARAGIV+E KNWP FFP+IHHDIANEI + LQRLQY+AFATYLGL L L WNI+AVTTAWIKGEGV IW LA+IYFI+GVPG YVLWYRPLYRAFR++SA FGW FL Y+LHI +C+FA+VAPPI+FKGKSL G LPA+DV Sbjct: 1 MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPAGFGYGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLAGILPAIDV 233
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.658e-68 Identity = 123/224 (54.91%), Postives = 156/224 (69.64%), Query Frame = 2 Query: 116 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNS------------------------RKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 MAG++ N F++++VNPF+ +V + +P ++ RKEEAAA+AGIV+E+KNWPPFFP+IHH+I+NEIPIHLQR+QY+AF+++LGL CL WNI+A TTAW+KGEGV IW LAIIYFI+GVPGAYVLWYRPLY A RTESA+KFGW FL YL+HI +C++A+VAPP FKGKSL G LPA+DV Sbjct: 1 MAGKHGRNGFEDDDVNPFAGGSVPPANNSRLPPLSHEPADFYNVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVWAAVAPPFPFKGKSLAGILPAIDV 224
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.117e-66 Identity = 135/256 (52.73%), Postives = 157/256 (61.33%), Query Frame = 2 Query: 116 MAGR--YDSNPFDE---EEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSA-SVPPATN--------------------------------------------------SRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 MAGR YD NPF+E +EVNPF+D A + TT S S PPAT+ R+EEAAARAGIVLE+KNWPPFFPIIH+DI NEIP+HLQR QYVAFA+ LGL LCL WNI+ VT AWIKGEG KIWFLA+IYFI G PGAY LWYRPLYRA R ESA+KFGW FL YL+HI +C++A+V+P I+F GKSLTG PA+ + Sbjct: 1 MAGRSRYD-NPFEEGGGDEVNPFADKASKGGSAGQSSYSGGAFYTTQSRPSAPPATHLSPLPPEPADFYNDFSTPVDIPMDTSKDMKTREKELLAKEAELNRREKEIKRREEAAARAGIVLEDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICVTAAWIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCVYAAVSPSILFVGKSLTGIFPAISL 255
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.117e-66 Identity = 110/148 (74.32%), Postives = 133/148 (89.86%), Query Frame = 2 Query: 272 RKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAYVLWYRPLY A RT+SA+KFG FL+YL HI +C+F++VAPP++F+GKSL G LPA+D+ Sbjct: 101 RREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDL 248
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.117e-66 Identity = 110/148 (74.32%), Postives = 133/148 (89.86%), Query Frame = 2 Query: 272 RKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAYVLWYRPLY A RT+SA+KFG FL+YL HI +C+F++VAPP++F+GKSL G LPA+D+ Sbjct: 101 RREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDL 248
BLAST of CB293996 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.329e-64 Identity = 126/245 (51.43%), Postives = 150/245 (61.22%), Query Frame = 2 Query: 125 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNS------------------------------------------------RKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWLFLIYLLHIGYCIFASVAPPIIFKGKSLTGALPAVDV 715 R+D NPF +EE+NPF+ N SVPPA+NS R+E+A AR G+V+EEKNWP FFP+IHHDI NEIPIHLQ++QYVAF T LGL CLLWNIVAVT AWIKGEG IW L+IIYF+AGVPGAYVLWYRPLYRA RT+SA+KFG F Y+ HI +C FA+VAPP+IF+GKSLTG LPA+++ Sbjct: 3 RHDPNPFADEEINPFA----------------------NHTSVPPASNSYLKPLPPEPYDRGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGFLPAIEL 225 The following BLAST results are available for this feature:
BLAST of CB293996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293996 ID=CB293996; Name=CB293996; organism=Citrus sinensis; type=EST; length=717bpback to top |