CB294001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: WIPI3_XENTR (WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus tropicalis GN=wdr45l PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.458e-33 Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 360 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSS 776 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGYVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN 152
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: WIPI3_CHICK (WD repeat domain phosphoinositide-interacting protein 3 OS=Gallus gallus GN=WDR45L PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.458e-33 Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 360 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSS 776 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNADPLKEKEKQEFPEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN 152
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: WIPI3_XENLA (WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus laevis GN=wdr45l PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.211e-33 Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 360 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSS 776 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ Sbjct: 13 LLYSGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVSYVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN 152
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: WIPI3_PONAB (WD repeat domain phosphoinositide-interacting protein 3 OS=Pongo abelii GN=WDR45L PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.193e-33 Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 360 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSS 776 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN 152
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: WIPI3_MOUSE (WD repeat domain phosphoinositide-interacting protein 3 OS=Mus musculus GN=Wdr45l PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 4.193e-33 Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 360 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSS 776 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN 152
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: WIPI3_HUMAN (WD repeat domain phosphoinositide-interacting protein 3 OS=Homo sapiens GN=WDR45L PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 4.193e-33 Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 360 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSS 776 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN 152
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: WIPI3_DANRE (WD repeat domain phosphoinositide-interacting protein 3 OS=Danio rerio GN=wdr45l PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.477e-33 Identity = 70/140 (50.00%), Postives = 93/140 (66.43%), Query Frame = 3 Query: 360 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSS 776 L+ +NQD+GCFA G GFR+YN +P KE + + GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKHEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN 152
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: ATG18_YARLI (Autophagy-related protein 18 OS=Yarrowia lipolytica GN=ATG18 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.802e-26 Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 369 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSS 776 VS+NQDY C + GT G++IYNC+PF + F + GG IVEMLF +++A+VG GD Q P ++ I + + I E F + V V+L+R R+VV+L+ +IY+Y ++KL+H IET NP +C LS SS Sbjct: 8 VSFNQDYSCVSVGTPQGYKIYNCDPFGKCFSK--ADGGMGIVEMLFCTSLIAVVGMGDQPQNSPRRLKIVNTKRQSTICELTFPTAVLGVRLNRQRLVVLLQDQIYIYDISNMKLVHTIETSPNPGAVCALSASSS 141
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: ATG18_YEAST (Autophagy-related protein 18 OS=Saccharomyces cerevisiae GN=ATG18 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.218e-25 Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 369 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLS 764 +++NQ C + GTS GF+I+NCEPF + + D SGG+ IVEMLF ++LALVG GD P ++ I + + I E F + + SVK+++ R+VV+L+ +IY+Y ++LLH IET NPRGL +S Sbjct: 11 INFNQTGTCISLGTSKGFKIFNCEPFGKFYSED--SGGYAIVEMLFSTSLLALVGIGDQPALSPRRLRIINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQIYIYDINTMRLLHTIETNPNPRGLMAMS 140
BLAST of CB294001 vs. ExPASy Swiss-Prot
Match: ATG18_YEAS7 (Autophagy-related protein 18 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG18 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.218e-25 Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 369 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLS 764 +++NQ C + GTS GF+I+NCEPF + + D SGG+ IVEMLF ++LALVG GD P ++ I + + I E F + + SVK+++ R+VV+L+ +IY+Y ++LLH IET NPRGL +S Sbjct: 11 INFNQTGTCISLGTSKGFKIFNCEPFGKFYSED--SGGYAIVEMLFSTSLLALVGIGDQPALSPRRLRIINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQIYIYDINTMRLLHTIETNPNPRGLMAMS 140 The following BLAST results are available for this feature:
BLAST of CB294001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CB294001 ID=CB294001; Name=CB294001; organism=Citrus sinensis; type=EST; length=780bpback to top |