CB304423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR2_ARATH (Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 2.704e-39 Identity = 84/141 (59.57%), Postives = 111/141 (78.72%), Query Frame = -3 Query: 30 MLNKLVPVVGNISESNLGLEGDLAKVIANEVDVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTIARELNFNNSKIEPNLDVEKEIELAMK-SKKALENDEDAR 449 ML KL+PV GNI +SN+GL+ D A+ IA EVDVIIN AANTT +ERYD+A+DIN RGP ++M FAKKCKK+K+F+ +STAYVN G+RQGRIMEKPF MGD IA E NF LDV++E++LA++ ++K +N ++A+ Sbjct: 201 MLTKLIPVTGNICDSNIGLQADSAEEIAKEVDVIINSAANTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVN-GQRQGRIMEKPFSMGDCIATE-NFLEGN-RKALDVDREMKLALEAARKGTQNQDEAQ 338
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR6_ARATH (Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.902e-25 Identity = 53/140 (37.86%), Postives = 89/140 (63.57%), Query Frame = -3 Query: 30 MLNKLVPVVGNISESNLGLEGDLAKVIANEVDVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTIARELNFNNSKIEPNLDVEKEIELAMKSKKALENDEDAR 449 M KL+PV+G+I E NLG++ ++A +I+ E+DVII+ TT +RYD A+ +N GP +++F K C+K+K+F+H STAYV GKR+G ++E P +G+ I +LN ++ E++LA ++ + E+ + Sbjct: 154 MKRKLIPVIGDIEEDNLGIKSEIANMISEEIDVIISCGGRTTFDDRYDSALSVNALGPGRLLSFGKGCRKLKLFLHFSTAYVT-GKREGTVLETPLCIGENITSDLN-----------IKSELKLASEAVRKFRGREEIK 281
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.032e-22 Identity = 62/128 (48.44%), Postives = 89/128 (69.53%), Query Frame = -3 Query: 75 MLNKLVPVVGNISESNLGLEG-DLAKVIANEVDVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTIA--RELNFNNSKIEPNLDVEKEIEL 449 M K+VPV G+IS NLGL+ DL + + +E+D+IIN AA T ERYDI + IN G +V+NFAKKC K ++ +H+STAY++ G++ G ++EKPF MG+T++ REL+ N IE +L +K EL Sbjct: 83 MREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYIS-GEQPGLLLEKPFKMGETLSGDRELDIN---IEHDLMKQKLKEL 206
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.761e-22 Identity = 57/132 (43.18%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 48 KLVPVVGNISESNLGLEG-DLAKVIANEVDVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTIARELNFNNSKIEPNLDVEKEIELAMKSKKALE 440 K+VP+ G+IS NLG++G DL + + NE+D+I+N AA T ERYD+ + +N GP +V+NFAKKC K ++ +H+STAYV G++ G + EK F+MG+T+ N + L +E E+EL + K L+ Sbjct: 86 KVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVR-GEKSGLLHEKTFHMGETL------NGHR---KLVIETEMELMKQKLKELQ 207
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.648e-20 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = -3 Query: 96 KLVPVVGNISESNLGLEG-DLAKVIANEVDVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTI----ARELNFNNSKIEPNLD 440 K+ V G+I +LGL+ DLA + ++VD I+N AA T ERYD+A+ IN G +V+NFAK+C K+K+ VH+STAYV G++ G IME P+ MG+T+ ++N+ ++ LD Sbjct: 90 KITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLAATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYV-CGEKSGLIMETPYRMGETLNGTTGLDINYEKKLVQEKLD 208
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.436e-18 Identity = 49/118 (41.53%), Postives = 77/118 (65.25%), Query Frame = -3 Query: 90 KLVPVVGNISESNLGL-EGDLAKVIANEVDVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTIARELNFNNSKIEPNLDVE 440 K+VPV G+I+ +LG+ + +L + + E+D+++N AA T ERYDI + IN G +V+NFAKKC K ++ +H+STAYV G++ G + EKPF M + N N +++ NL+ E Sbjct: 86 KVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYV-CGEKPGLLPEKPFVMEEI----CNENGLQLDINLERE 198
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.655e-18 Identity = 51/139 (36.69%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 36 MLNKLVPVVGNISESNLGL-EGDLAKVIANEVDVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTIARELNFNNSKIEPNLDVEKEIELAMKSKKALENDED 449 + K+V V G+I+ LG+ + L + + E+D+++N AA T ERYD+ + IN G +V+NFAKKC K+++ +H+STAYV G++ G I EKPF M E N + ++ ++++E+E+ MK + N++D Sbjct: 83 LYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVNVAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYV-CGEKPGLIPEKPFIM------EEIRNENGLQLDINLEREL---MKQRLKELNEQD 211
BLAST of CB304423 vs. ExPASy Swiss-Prot
Match: FACR7_ARATH (Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 43/127 (33.86%), Postives = 70/127 (55.12%), Query Frame = -3 Query: 48 GLEGDLAKVIANEV----------DVIINFAANTTLHERYDIAIDINPRGPSHVMNFAKKCKKIKVFVHMSTAYVNDGKRQGRIMEKPFYMGDTIARELNFNNSKIEPNLDVEKEIELAMKSKKALE 398 G G LAKV+ + +++ + + +RYD+A+ IN G +V+NFAKKC K K+ +H+ST YV G+R G I+EK F MG+++ N K + +++ E+ + KSK+ E Sbjct: 18 GASGFLAKVLVERILRLQPNVKRLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYV-CGERPGHIVEKHFAMGESL-------NGKNKVDINTERRL-ADQKSKQFKE 135 The following BLAST results are available for this feature:
BLAST of CB304423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304423 ID=CB304423; Name=CB304423; organism=Citrus sinensis; type=EST; length=451bpback to top |